Gene Afer_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1365 
Symbol 
ID8323446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1419197 
End bp1419748 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID644952497 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003109964 
Protein GI256372140 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCACG GACACCATCA CCATCCAGGT GAAGGAGCCT TCGGCGAAGG ACCGCATCGT 
GGAGCTCGCG GACCCTTCGG CGGCGGACCC TTCGGAGGCG GGCCATTCGG CGGCGGGATG 
CGACGCGGAG GACGTGCACC GCGCGGACGC ATTCGAGCTG AGATCCTGCG GCTCCTCCTC 
GATGGGCCCA AGCACGGCTA CGAGCTGATG AACCTCATCG CCGAGCAGAG TGGAGGCGCA 
TGGCAGCCGA GCCCCGGCTC CATCTACCCC ACGCTCCAGC TCCTCGAGGA TCAAGGACTC 
GTGGCGAGCG CCAGCGATGG CGATCGTCGC GTCTACCAGC TCACCGACGC AGGCCGTGAG 
GAAGCCGAAC GACTCCAGCA CGAGCCCGGG CCACACGCAG GTCCGGCTGG CGCCCGACTC 
GGTCCCGAGA TCGCTCAGGT CATGGGCGCG CTGCGCACGA TCGCGATGTC GGGGACGCCA 
GAGCAGCGTG ACGCTGCCCA GAGCGCCATC GCGGAGTTTC GCCGAACGCT CTACCAGATC 
CTCGCGCAGT AG
 
Protein sequence
MCHGHHHHPG EGAFGEGPHR GARGPFGGGP FGGGPFGGGM RRGGRAPRGR IRAEILRLLL 
DGPKHGYELM NLIAEQSGGA WQPSPGSIYP TLQLLEDQGL VASASDGDRR VYQLTDAGRE 
EAERLQHEPG PHAGPAGARL GPEIAQVMGA LRTIAMSGTP EQRDAAQSAI AEFRRTLYQI 
LAQ