Gene Afer_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1338 
Symbol 
ID8323418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1393608 
End bp1394300 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID644952469 
Productputative transcriptional regulator 
Protein accessionYP_003109937 
Protein GI256372113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAC GCCCCCCGCA CCGAGATTTC GCAAGGAATC TTTCGCAAAT TTTGTTGCGC 
AAGGATTCCT TCGTAACTAG CATGGGAGCC ATGACCGATG CCGCCGCGAC CCCACGACAC 
CTCCGCGACC CACGCGCGTT GCGCGCACTC GCACACCCGT TGCGCATCAA GCTCCTCGAA 
GCCCTGGTCA CCCATGGCAC GCTCACCGCG ACGCAAGCCA GTGAGCTGTT CTCGACGACG 
CCTGCGAGCT GCTCGTTCCA CCTTCGTGAA CTCGCACGCT TCGGCTTCGT CGAGCGCGCT 
GACGGTGGTC ACGGACGAGA ACGGCCCTGG AGGGCCGTCG CCGCCCCCCT GCACTTCGAC 
CCCCACGCCG ACGACCCGGA CGAAGCCATC GCGGCGAGCG AGCTTGCTCG CGTCCTCCAG 
GGCCGCTGGA TCGAGCGTTT CGAAGGCTGG TCGCAGGTGG CCCACACGTA TGCAGCACCG 
TGGCGCCACG CGCTCTCGAC ATCTCAGTTC GTCGTCTGGC TCACCCCCAC TGAGACCACC 
GACCTGCTCG CCGAACTCGC TCGCCTGATC CAGGAGCGCT ACCCAGACCG GCTCAGCGAT 
CCCTCGACCC GTCCCCCTGA CGCCATGGCT GTCGAGATCA TCCTCGATGC GCACCCCTTC 
GACCTCGAGG CTGGCGGAGC CCAGCACCAA TGA
 
Protein sequence
MAQRPPHRDF ARNLSQILLR KDSFVTSMGA MTDAAATPRH LRDPRALRAL AHPLRIKLLE 
ALVTHGTLTA TQASELFSTT PASCSFHLRE LARFGFVERA DGGHGRERPW RAVAAPLHFD 
PHADDPDEAI AASELARVLQ GRWIERFEGW SQVAHTYAAP WRHALSTSQF VVWLTPTETT 
DLLAELARLI QERYPDRLSD PSTRPPDAMA VEIILDAHPF DLEAGGAQHQ