| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1293 |
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| Symbol | |
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| ID | 8323369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1345927 |
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| End bp | 1347045 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952424 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_003109896 |
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| Protein GI | 256372072 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0649445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCGACT ACTACGAAGT CCTGGGGGTG TCTCGGAACG CCTCCAGTGA GGAGATCAAG
CGCGCGTATC GGCGCCTCGC TCGTCAGCTG CACCCAGATG TGAACGGCGG CGATCGAGGC
GCCGAGGAGC GCTTCAAGCT CGTGACCGAG GCCTACGACG TCCTGAGCGA CCCGGACAAG
CGTCGAACCT ACGACCGGAC GGGATCGGTT CAGGGCGGAC CGTTCGGGCC CGGAGACCCC
TTCGGCGGCG GGCCGTTCGG GCCGGACTTC TCCGACCTGT TCCAGAGCGT CTTCGGCGGG
TTCACGCAGC AGCCCCAAGG GGCCCAGCGT CGCGGCGAGG ACATCGAGAC CGAGGTGCGG
CTCACCTTCG AAGAGGCCGT CTTCGGGGCG CAGAAGGAGA TCTCCCTGCG CATGCCCGCG
GTGTGTGGCA CCTGCCAAGG CTCGGGCGCC CGGCCGGGCA CCCAGCCGCG TGTGTGCTCG
CAGTGCCAGG GAACCGGTGC GGTCAGGCGG ATCACCCAGT CGTTCCTCGG GCGCATGGTG
ACCACGGCGA CCTGCGACGT CTGTCGAGGC GAGGGAACGG TGATCGCCGA CCCGTGCCCC
GACTGCCGAG GCGAGGGTCG ACGCACGCAG GAGCGCCGCT TCGTGGTCGA TGTCCCACCT
GGTGCCGACA ATGGGTTGGT CCTCAAGCTC TCCGGCAAGG GGCCGGCAGC GCCCCGTGGT
GGTCAGCCGG GAACGCTGTA CGTCCACGTG CTGGTGGAGC CGTCGGAGCG GTTTGAGCGG
CGCGGCAACG ATCTCATCAC CCGTGTCCAG ATCTCGGCGC CGCAGGCGGT GCTCGGTACC
AAGCTCGAAC TCGAGACGCT CGATGGGCTC GAGGTCATCG AGATCCCCGC CGGCACGCAG
CCTGGGTGGG CGACGCGCGT TCGGGGGAGA GGTGTGCCTG CGCTGTCGGG TCGTCGCGGG
CGCGGCGACC TCATCGTCGA GGTCCAGGTG ACGATCCCGA GCGAGCTCAC GGCCGAGGAG
GACGAGCTGT GGCGGCGCCT CGCTGCCCTG CGTGGTGAGC TGGTCAGCGA GCATCACGAC
CAGTCGCTGC TCTCGAAGCT GCGTTCCGCC TTCAAGTAG
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| Protein sequence | MVDYYEVLGV SRNASSEEIK RAYRRLARQL HPDVNGGDRG AEERFKLVTE AYDVLSDPDK
RRTYDRTGSV QGGPFGPGDP FGGGPFGPDF SDLFQSVFGG FTQQPQGAQR RGEDIETEVR
LTFEEAVFGA QKEISLRMPA VCGTCQGSGA RPGTQPRVCS QCQGTGAVRR ITQSFLGRMV
TTATCDVCRG EGTVIADPCP DCRGEGRRTQ ERRFVVDVPP GADNGLVLKL SGKGPAAPRG
GQPGTLYVHV LVEPSERFER RGNDLITRVQ ISAPQAVLGT KLELETLDGL EVIEIPAGTQ
PGWATRVRGR GVPALSGRRG RGDLIVEVQV TIPSELTAEE DELWRRLAAL RGELVSEHHD
QSLLSKLRSA FK
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