| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1261 |
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| Symbol | |
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| ID | 8323337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1317246 |
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| End bp | 1319012 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952393 |
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| Product | DNA primase |
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| Protein accession | YP_003109865 |
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| Protein GI | 256372041 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCATAG CCGACGCCGA TGTGCGGCGC GTACGCGATG CGACGGACCT CGTCGCGCTC
GTCTCCGAGA CGGTCGCGCT GCGCCGGGTC GGGAGGCGTT GGGTCGGTCT GTGTCCGTTC
CACGACGAGC GCTCGCCGTC GTTCAGTGTG AACCCAGAGC TCGGGGTGTA CTACTGTTTC
GGCTGTCACG CCCGAGGTGA TGCGATCACC TTCGTCCGTG AGGTGCAGGG CCTCGACTTC
ACTGAAGCCG TCGAGCAGCT TGCCCGACGA GCCGGTCTTC GCATCGAGCA CGAGGCTGCC
GGTGAGCCGC GAGCGTCCAC GCGTCGCGAG GCACTTACCG TGCTCGAAGC CCAGACCACC
TGGTACGCGG ACCAGCTCGC TGGACCGGCA GGTGAGCGCG CTCGAGAGTA TCTCGCGGCT
CGAGGGATCA GCGAGGACCA GATCGCGAAG TTCCGCATCG GCTATGCACC GCCGTCGCGA
GCGGCGAGCC TCGCCGAACT CGGAGCATCG GCGGCGATCG CGCTCGAGGT CGGGATCCGC
GTGCGCGGCC AGGACGGGTC GCTGCATGAC CCGATGAGCG GACGCATCGT GTTCCCGATC
CGCGAGGTCG CGGGTCAGGT CATCGCGTTC GGCGGTCGGG TCGTGCCTCC GGCCAGAGAT
GGCGTCCCGA AGTATCGGAA CACGCAGGAC ACGGCCTACT ACCACAAGCG TCAGGTCCTC
TACAACCTCG ATCGAGCGCG GTCGACGTTC CTGCGCGAGC GGCGCGCGTT GGTGTGCGAG
GGCTACACGG ACGTGATCGC ACTCGATGCC GCTGGCGTCG CTGCGGTCGC GACCTGCGGC
ACGGCGCTCA CCGACGACCA CCTGCGCATC CTGCGTCGCT TCGCTCCCCA GGTCGTGGTC
CTGTTCGACG GTGACGACGC AGGCCAGCGA GCGGCGGAGC AGGTCGCCCC CCTCGCCGAG
GCAGCAGGCG TGGAGCTTCT CGTGGCCACC TTGCCGGGAG GACGTGATCC TGCCGAGGCC
TTCGCCGAGG ATCCCGATTC GCTTCGACAG GCTCTCGCGA GCCCCGTGCC GGTGGCTCGG
TTCCGCCTTG AACGAGTCCT CGCCCGTGCC GATCTTCGAT CGGTGGAGGG GCGGGCGCGT
GCAGTGGCCG ACGTCGCTGC GGTGCTCGCC TCGGTCGGCG ACCCGCTCGT GCGGTCTGAG
TACATCGCCA TGCTGGCGGA TCGGACCGGA TTTCGCGAGG CCGAGCTTGC GGCGCGGCTT
CCGAGCGCCC TCCGACCGCG ACGTCTGCGT ACGAGCGAGG CGTCAGGCCT CGATCGCCCT
GCGGCGTCGG TGCTCATCGC CCTCGCCAGC GATCCTGGGC TCGGGGACCT CGTGGTACCC
GCACTGTTTC GCGACCCGAC CTATCGTGCA CTCGCTGCAG CCCTCGGCTC GCGAGGAGAG
GCGCCGGTCG CGGCCGCGCT CGAGGGCGTC GGCGATGACG TCCGCGAGCT CTACCATCGC
ATCGCTGCCA GCGACTCCGA AGGGAGCTTC GACGATGCCC TGGTGGTGCT CGTGTTGCGC
GAGGCGGGTG TCGAACTCGA GCGTGAGGCG CGCGGCCTTG CCGGCCTCTC TGGACCTGAG
CGCGAGGAGC GCCAGCGTCG CTGGACGGAT CACATCATGA CCCTGCATCG CCTTCGTACG
GAACCTCGAG ATCTCGATGC AGCCGGTGCG CTGCTCGCCT ACCTCGTCGA GGCGCGGTCG
GACGTCGCGC TCGGGAGCGG CTCGTGA
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| Protein sequence | MAIADADVRR VRDATDLVAL VSETVALRRV GRRWVGLCPF HDERSPSFSV NPELGVYYCF
GCHARGDAIT FVREVQGLDF TEAVEQLARR AGLRIEHEAA GEPRASTRRE ALTVLEAQTT
WYADQLAGPA GERAREYLAA RGISEDQIAK FRIGYAPPSR AASLAELGAS AAIALEVGIR
VRGQDGSLHD PMSGRIVFPI REVAGQVIAF GGRVVPPARD GVPKYRNTQD TAYYHKRQVL
YNLDRARSTF LRERRALVCE GYTDVIALDA AGVAAVATCG TALTDDHLRI LRRFAPQVVV
LFDGDDAGQR AAEQVAPLAE AAGVELLVAT LPGGRDPAEA FAEDPDSLRQ ALASPVPVAR
FRLERVLARA DLRSVEGRAR AVADVAAVLA SVGDPLVRSE YIAMLADRTG FREAELAARL
PSALRPRRLR TSEASGLDRP AASVLIALAS DPGLGDLVVP ALFRDPTYRA LAAALGSRGE
APVAAALEGV GDDVRELYHR IAASDSEGSF DDALVVLVLR EAGVELEREA RGLAGLSGPE
REERQRRWTD HIMTLHRLRT EPRDLDAAGA LLAYLVEARS DVALGSGS
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