Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1221 |
Symbol | |
ID | 8323295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1276796 |
End bp | 1277683 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952351 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_003109825 |
Protein GI | 256372001 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.329295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGT ACGAAGTCGG CACGGCACGA GTCAAGCGGG GACTCGCCGA GATGCTCAAG GGCGGCGTCA TCATGGACGT GGTCAACGCG GAGCAGGCGA AGATCGCCGA GGATGCGGGT GCGGTCGCGG TCATGGCGCT CGAGCGCGTT CCTGCGGATA TCCGTCGTGA TGGCGGCGTC GCACGCATGA GCGACCCCGC CCTGATCGAG CAGATCAAGG ACGCCGTGAC TATCCCGGTG ATGGCCAAGG TTCGCATCGG GCACTTTGCC GAGGCTCAGC TGCTCGAGGC TCTCGAGGTC GACTACATCG ACGAGAGTGA GGTGCTCACG CCAGCCGATG AGGAGTTCCA CGTCGACAAG TGGGCCTTCG AGGTCCCGTT CGTCTGTGGC GCGACCAACC TCGGGGAGGC GCTGCGTCGT ATCGCTGAGG GTGCGGCGAT GATCCGGTCG AAGGGTGAGG CGGGTACCGG CAACGTCGTG GAGGCGGTCC GACACCTGCG CTCCATCACG CGGGACCTGC GAGCCATCGC CCAGGCGCGC CCGGAGGAGC TCTTTGGATG GGCCAAGCGA CTCGGCGCTC CCTACGAACT CGTCGCTGAG GTCCATGCGC TCGGAGGCAA GCTCCCTGTG CCGCTGTTCT GCGCGGGAGG TATTGCGACC CCAGCCGACG CGGCGCTCAC GATGCAGCTC GGCGCCGAGG CGAACTTCGT GGGCTCGGGC ATCTTCAAGA GCGGTGATCC CGCCAAGCGG GCACGTGCCA TCGTGGAGGC GACCACGCAC TACAACGAGC CCGACGTGGT GCTCGCGGTG TCGCGCAACC TCGGTGAGCC GATGGTCGGC CTCGGTCTCG ATCAGATCGA CGAGCGACTC GCCGAGCGCG GTTGGTGA
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Protein sequence | MTQYEVGTAR VKRGLAEMLK GGVIMDVVNA EQAKIAEDAG AVAVMALERV PADIRRDGGV ARMSDPALIE QIKDAVTIPV MAKVRIGHFA EAQLLEALEV DYIDESEVLT PADEEFHVDK WAFEVPFVCG ATNLGEALRR IAEGAAMIRS KGEAGTGNVV EAVRHLRSIT RDLRAIAQAR PEELFGWAKR LGAPYELVAE VHALGGKLPV PLFCAGGIAT PADAALTMQL GAEANFVGSG IFKSGDPAKR ARAIVEATTH YNEPDVVLAV SRNLGEPMVG LGLDQIDERL AERGW
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