Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1209 |
Symbol | |
ID | 8323283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1264007 |
End bp | 1264936 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644952340 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003109814 |
Protein GI | 256371990 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTGAGC TGCGCCTCAC GATCGGAGCG TCGCTCGCTG GCGAGCGTCT CGATCGGGCG GTCGCGATCG CCGGCGGGAT CGAGCGGGCG TTCGCCCAGC AGCTCGTGGA CGATGGCGGG GTCCTGGTCG ACGGCCGTGT CGAGCAGCGA CGTTCGAGGC GCCTGCGGGC CGGCGAGCTC CTCGAGGCCA CCTGGCCGGA TCCTGCCGCT CCGCCGGCTC CGGAGGGCGC ACCGGTGGTC TGCTACGAGG ACGACGACGT GGCGGTGATC GACAAGCCGG CTGGTCTGAT CGTCCATCGC ACCCACCTCC GCGATGTGCG TCCGAGCGTC GCGGATTGGG CACTCGAACG GTGGCCGTCG CTCCGTGCCC TTCCCGGCGA TCCGTTGCGT CGTGGGCTCG TGCATCGACT CGATCGCGGC ACGAGTGGCC TCATGGTCAT CGCCCTCAGC GCGGGCGCCT ACGAGTCGTT GCGGCGGGCG GTCCACGACC ACGAGGTGGA GCGTCGCTAC CGTGCACTCG TCGTGGGCGT ACCGCCGCAA GCTGCACGCA TCGAGGCGCC GCTCGGTCGC GATCTGCGCG ATCTGTCCCG TGTCGCGGTG GTGAGCGGCG GTCGTGACGC TCGAACGCAG CTGAGGGTGG TCTGGCATGG TCCGGATACG TCGCTCGTCG AGCTCACGCT GGAGACCGGG AGGACCCACC AGATCCGTGT GCACCTCAGC GCCATCGGGC ATCCGATCGT TGGCGACGAG GTCTATGGCG TCCCCTACGG CGGGCTCGAA CGTCCGTTCC TCCACGCGAC CGCGCTCGCG TTCGAGCATC CAACGCGTCC TGGACGCGTG GAGGTGACCG CGGAGCTCCC GGAGGACCTC GGCGAGCTCG CGGCGCGCGC CCGCACGGAG GCGATTCTCC GCGTCGACGA GGGGCGTTGA
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Protein sequence | MGELRLTIGA SLAGERLDRA VAIAGGIERA FAQQLVDDGG VLVDGRVEQR RSRRLRAGEL LEATWPDPAA PPAPEGAPVV CYEDDDVAVI DKPAGLIVHR THLRDVRPSV ADWALERWPS LRALPGDPLR RGLVHRLDRG TSGLMVIALS AGAYESLRRA VHDHEVERRY RALVVGVPPQ AARIEAPLGR DLRDLSRVAV VSGGRDARTQ LRVVWHGPDT SLVELTLETG RTHQIRVHLS AIGHPIVGDE VYGVPYGGLE RPFLHATALA FEHPTRPGRV EVTAELPEDL GELAARARTE AILRVDEGR
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