Gene Afer_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1209 
Symbol 
ID8323283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1264007 
End bp1264936 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID644952340 
Productpseudouridine synthase, RluA family 
Protein accessionYP_003109814 
Protein GI256371990 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTGAGC TGCGCCTCAC GATCGGAGCG TCGCTCGCTG GCGAGCGTCT CGATCGGGCG 
GTCGCGATCG CCGGCGGGAT CGAGCGGGCG TTCGCCCAGC AGCTCGTGGA CGATGGCGGG
GTCCTGGTCG ACGGCCGTGT CGAGCAGCGA CGTTCGAGGC GCCTGCGGGC CGGCGAGCTC
CTCGAGGCCA CCTGGCCGGA TCCTGCCGCT CCGCCGGCTC CGGAGGGCGC ACCGGTGGTC
TGCTACGAGG ACGACGACGT GGCGGTGATC GACAAGCCGG CTGGTCTGAT CGTCCATCGC
ACCCACCTCC GCGATGTGCG TCCGAGCGTC GCGGATTGGG CACTCGAACG GTGGCCGTCG
CTCCGTGCCC TTCCCGGCGA TCCGTTGCGT CGTGGGCTCG TGCATCGACT CGATCGCGGC
ACGAGTGGCC TCATGGTCAT CGCCCTCAGC GCGGGCGCCT ACGAGTCGTT GCGGCGGGCG
GTCCACGACC ACGAGGTGGA GCGTCGCTAC CGTGCACTCG TCGTGGGCGT ACCGCCGCAA
GCTGCACGCA TCGAGGCGCC GCTCGGTCGC GATCTGCGCG ATCTGTCCCG TGTCGCGGTG
GTGAGCGGCG GTCGTGACGC TCGAACGCAG CTGAGGGTGG TCTGGCATGG TCCGGATACG
TCGCTCGTCG AGCTCACGCT GGAGACCGGG AGGACCCACC AGATCCGTGT GCACCTCAGC
GCCATCGGGC ATCCGATCGT TGGCGACGAG GTCTATGGCG TCCCCTACGG CGGGCTCGAA
CGTCCGTTCC TCCACGCGAC CGCGCTCGCG TTCGAGCATC CAACGCGTCC TGGACGCGTG
GAGGTGACCG CGGAGCTCCC GGAGGACCTC GGCGAGCTCG CGGCGCGCGC CCGCACGGAG
GCGATTCTCC GCGTCGACGA GGGGCGTTGA
 
Protein sequence
MGELRLTIGA SLAGERLDRA VAIAGGIERA FAQQLVDDGG VLVDGRVEQR RSRRLRAGEL 
LEATWPDPAA PPAPEGAPVV CYEDDDVAVI DKPAGLIVHR THLRDVRPSV ADWALERWPS
LRALPGDPLR RGLVHRLDRG TSGLMVIALS AGAYESLRRA VHDHEVERRY RALVVGVPPQ
AARIEAPLGR DLRDLSRVAV VSGGRDARTQ LRVVWHGPDT SLVELTLETG RTHQIRVHLS
AIGHPIVGDE VYGVPYGGLE RPFLHATALA FEHPTRPGRV EVTAELPEDL GELAARARTE
AILRVDEGR