| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1155 |
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| Symbol | |
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| ID | 8323226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1205169 |
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| End bp | 1205987 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952284 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_003109761 |
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| Protein GI | 256371937 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.172529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCTA CCCCCGCCGT GGCACTCACC ATCGCTGGCT CCGACTCTGG CGGCGGAGCC
GGGATCCAAG CCGACCTCGT GACCTTTGCC GCGTTCGAGG TCCACGGGAC GAGCGCCATT
ACCGCCGTCA CCGCACAGAA CACCGTCGGC GTCTCCGCGG TCGTCACCAT CGACCCCGAC
GTCATCGAGG CGCAAGTCCG ATCCGTGACC GACGACTTCA TGGTGCGTGC AACGAAGACC
GGCATGCTCG CCACCGCGCC GATCGTCGAG CGCGTCGCCG CGCTCGCTGC CTCCGGTATC
CTCGGTCCTC TCGTCGTCGA CCCCGTGATG GTCTCGACGA CCGGCGCGAC CCTGCTCGAT
GCTGACGCCG TGCAGGCTGT GCGTGACGCC CTCCTCCCGA GTGCCGCGCT CGTCACACCC
AACCGTGCCG AAGCGGAACT GCTCACGGGC ATAGCCATCA CGAGCATCGA GGCCCAGCGT
GCTGCTGCGC AGCGGCTGGT CGAACTCGGC GCTCGCGCCG CGCTCGTCAA GGGCGGCCAC
CTCGACGGAC CCGATGCGAT CGACATCTTG TTCGACGGCC GCAACGTCGT GGAACTGCGC
GCACCACGAG TATGGACGCG CAACGACCAC GGCACCGGCT GCACGCTCTC GGCTGCGATC
TGCGCGTGCC TCGCGCGCGG GCTCACGCTC CCCCGCGCCG TCGAGGAGGC GAAGGCCTAC
GTGACTCGCG GTCTCGCCGA CGGCGCCGAC TGGGGCCTCG GAACTGGACG CGGGCCTTTC
AGCCATTTCG CCAAGGGCCG CCCAGCGGTC GTGGCCTGA
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| Protein sequence | MTPTPAVALT IAGSDSGGGA GIQADLVTFA AFEVHGTSAI TAVTAQNTVG VSAVVTIDPD
VIEAQVRSVT DDFMVRATKT GMLATAPIVE RVAALAASGI LGPLVVDPVM VSTTGATLLD
ADAVQAVRDA LLPSAALVTP NRAEAELLTG IAITSIEAQR AAAQRLVELG ARAALVKGGH
LDGPDAIDIL FDGRNVVELR APRVWTRNDH GTGCTLSAAI CACLARGLTL PRAVEEAKAY
VTRGLADGAD WGLGTGRGPF SHFAKGRPAV VA
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