Gene Afer_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1116 
Symbol 
ID8323186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1162162 
End bp1163049 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID644952244 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003109722 
Protein GI256371898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGAGTC CGGCAAGGGG CCGTGCCTCG TGGGCCGTCG TGGGGGTCAC GGCGATCTGG 
GGAGTCACCT TTCCGCTGAA CGAGCGCGCA CTCGGGAGTC TCGGCCCGGT CGAGCTCACC
TTCGGACGCT TCAGCGTCGC GGCGCTCGTG CTGTGGGTGC TGGCGCTCGC ACGGGGCCAT
CGCATCGATC GACGGAGCGT CGTTGCCGGC CTGGCGAGCG GCCTCGCGCT CTTTGGCGGC
TACCTCACTC AGATCGAGGG TCAACGCTAC GTGTCACCGA CCATCGCGGG GTTTCTGACG
GGCTTGTCGG TGGTGGTTGT GCCGATCTTC GTGATGGCGC TCGGTCGACG TCCGAGCGCT
CGTCAGCTCG TCGGTATCGT CCTCGCGGCC CTCGCCCTCG TGGTGCTCTC GGCCCCACGA
GGGCATGCGT CGTTCGTCGG GATCGGCCTC GAACTCGCGT GCGCCGGCTT CTTCGGGGCT
CAGATCGTCG TGCTCGAGGA GCTCGGGTCT CCCGGTGATG CGATGGTGAC AGCGGCACTG
CAGATGACGA CGATCGCGGC CGCGACCGTG GTCGCGGCAC CGCTCGTGGG TGCGGGTCTC
GTGCCGACGC ACCTCACGCC GATCGCGGTG ACGGCCATCG TCTACGATGG GGTGCTCGCG
AGCGCACTCG CCTTCGTGGT CCAAGCCTGG GCGCTCGCTC ACGCCGACAG CGTGCAGATC
TCCGTGATCT ATGCGGCCGA ACCGCTGTTC GCCGCGCTCG CGTCGCTGGC CTTCGGGTAT
GCATCCCTGG GCCTACCGGT GGTGGTCGGT GGACTTCTCG CGCTCGCTGC GATGGTCCTG
GCATCCGTTC CGCCGGCCGC AGCACGGTCG TCCGACCCCA CCGGCTAG
 
Protein sequence
MRSPARGRAS WAVVGVTAIW GVTFPLNERA LGSLGPVELT FGRFSVAALV LWVLALARGH 
RIDRRSVVAG LASGLALFGG YLTQIEGQRY VSPTIAGFLT GLSVVVVPIF VMALGRRPSA
RQLVGIVLAA LALVVLSAPR GHASFVGIGL ELACAGFFGA QIVVLEELGS PGDAMVTAAL
QMTTIAAATV VAAPLVGAGL VPTHLTPIAV TAIVYDGVLA SALAFVVQAW ALAHADSVQI
SVIYAAEPLF AALASLAFGY ASLGLPVVVG GLLALAAMVL ASVPPAAARS SDPTG