| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1079 |
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| Symbol | |
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| ID | 8323148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1121926 |
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| End bp | 1123209 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952207 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_003109686 |
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| Protein GI | 256371862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAG AGATGGCGTC GGAGTCCGCG AGCGAACGCG AGCTGGGATC CGAGCATGGG
GCTCCCGCGG CCTCGGACGC GATCGTCCTC GACGACCTTG GCGAGCAGGG ACTCGAGGAG
GCGATTGCCA AGAGCCTCGT CGAGTTCGAC GAGGGTGACA TCGTCAGCGG ACTGGTCGTC
AAGGTGGACA AGGATGAGGT CCTCCTGGAC ATTGGCTACA AGTCGGAGGG GGTCATCCCG
CTCCGAGAGC TCTCGATCCG TAAGGACGTG AGCCCCGCCG ACGTGGTCAG CGTTGGCGAC
CGGATCGACG CCTTGGTCCT CCAGAAGGAA GACCGCGAGG GGCGATTGGT CCTGTCGAAG
AAGCGGGCCC AGTTCGAGAA GGCCTGGAAG GAGATCGAGG CGATCAAGGC TCGCGACGGC
GTGGTCCGCG GCGAGGTCAT CGAGGTCGTC AAGGGTGGCC TCATCGTCGA CATCGGACTG
CGAGGCTTTC TGCCCGCGTC CCATGTGGAC CTGCGACGGG TGCGTGATCT CGCACCGTTC
GTGGGCCAAG ACATCGAGGC CAAGATCATC GAACTCGATC GGGGCCGCAA CAACGTCGTG
CTGAGTCGGC GGGCCTACCT TGAGGAGAAT CAGCGCGATC AGCGCGAGCG CTTCTTGACC
TCGATTCGCC CGGGCGAGGT GCGCAAGGGC GTCGTCTCGT CGATCGTGCA CTTCGGCGTC
TTCGTCGACC TTGGCGGTAT GGACGGGCTC GTGCACGTGT CGGAACTCTC GTGGAATCAT
GTCGATCACC CATCGTCGGT CGTCTCGGTC GGCGATGAGG TGCAGGTCCT GGTGCTCGAG
GTCGACCAGG AGCACGAGCG CATCTCACTG TCGCTCAAGG CGACGCAGCG GGACCCGTGG
CAGGAGTTCG CTTCGGCTCA CAAGATCGGG GAGCTGGTCT ACGGACGGGT CACCAAGATC
GTGCCGTTCG GGTGCTTCGT GCAAGTTGCG CCCGGGATCG AAGGTCTTGT GCACATCTCG
GAGATGGCCC TCCACCACGT CGATCTCCCG GAGCAGGTGG TCTCGGTCGG CGAGGAGCTG
TGGGTCAAGA TCATCGATCT CGACCCCGGT CGTCGGCGCA TCAGCCTGTC GATCCGTCAG
GCGCTCGAGG GCGGGGAGCT CGCACCCGAG TACCGAGAGG CCTTTGCCGA GTACTACGAC
GACGAGGGCA ACTACATCGG CCCGCCTCAG GGCGAGGAGG GAACCGGTGA CGGCACGGGC
GACGACGACA GCGCGGACGC CTGA
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| Protein sequence | MTEEMASESA SERELGSEHG APAASDAIVL DDLGEQGLEE AIAKSLVEFD EGDIVSGLVV
KVDKDEVLLD IGYKSEGVIP LRELSIRKDV SPADVVSVGD RIDALVLQKE DREGRLVLSK
KRAQFEKAWK EIEAIKARDG VVRGEVIEVV KGGLIVDIGL RGFLPASHVD LRRVRDLAPF
VGQDIEAKII ELDRGRNNVV LSRRAYLEEN QRDQRERFLT SIRPGEVRKG VVSSIVHFGV
FVDLGGMDGL VHVSELSWNH VDHPSSVVSV GDEVQVLVLE VDQEHERISL SLKATQRDPW
QEFASAHKIG ELVYGRVTKI VPFGCFVQVA PGIEGLVHIS EMALHHVDLP EQVVSVGEEL
WVKIIDLDPG RRRISLSIRQ ALEGGELAPE YREAFAEYYD DEGNYIGPPQ GEEGTGDGTG
DDDSADA
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