| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1040 |
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| Symbol | |
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| ID | 8323104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1076665 |
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| End bp | 1077324 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952167 |
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| Product | regulatory protein TetR |
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| Protein accession | YP_003109651 |
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| Protein GI | 256371827 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.591621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCATGCTG GAGCAGTCGG CGGCGCCGGC TCGAAACCGA CCACGTCTCG GCGAGTCGCG
CTCACGCGGG AGCGTGTCGT CGCCGCAGCC CTCGAGTCGC TCGCGACCGA TCCGAGCGGG
AGCGGGCTCA CCATGCGCAC CCTTGCCCGC AGGCTCGGCG TGGCGCCGAT GACGATCTAC
GGCCACGTCC GAGACCGCGA CGATCTCCTC GAAGCGCTCC TCGACAAGCT CTTCGCGAAC
CGATGGGAGC CTGACCCTTC GCTCCCCTGG CGCGACTGGA TCGTCGACGC CGCCACGCGG
CTGCTGGAGC TGCTCCTCGC CTACCCGCCG CTTCTCGAGC TCTACCTCCG TCGGCCCGTC
GCGACGCAGC TCGCTCGTAC CCGTATGGAC GCGATGGCAA CGCGGCTCGC GGCGGGCGGG
TTCACGCCGG AGGCAGCCCA TCAGGTCTAC GCCGCCCTCC ACACCTACAC CATCGGCTTC
GCTGTCCTGC GCGCCGAGCG CCTCCGCAAC CAGCACGTAC CGCGTGACCC GATGGAAGCG
GACCTCGCGC GCTTCACGAC GGTCGAGCAG TTCGCGATCT CGTTGAACTT CCTGATCGAG
GGAGCCCGCG ACCGGCACCT GGCCCAGGGC CAGTCTCGAG AACCAGAGGA GCACCCGTGA
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| Protein sequence | MHAGAVGGAG SKPTTSRRVA LTRERVVAAA LESLATDPSG SGLTMRTLAR RLGVAPMTIY
GHVRDRDDLL EALLDKLFAN RWEPDPSLPW RDWIVDAATR LLELLLAYPP LLELYLRRPV
ATQLARTRMD AMATRLAAGG FTPEAAHQVY AALHTYTIGF AVLRAERLRN QHVPRDPMEA
DLARFTTVEQ FAISLNFLIE GARDRHLAQG QSREPEEHP
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