Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1035 |
Symbol | |
ID | 8323099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1070303 |
End bp | 1071736 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644952162 |
Product | amino acid permease-associated region |
Protein accession | YP_003109646 |
Protein GI | 256371822 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAG TTCCGTCCGG CGACGGGGAT ACCGCGTCGG GCCATCCGCG GCTCAGGCAC AACGCGCTCG GCGTCGGTGA CATCCTCGGG GTGTCGTTGG CCGATACGGC GCCGGCCATG AGCTTTTTCT TTTCGTTCGC CGCGATCGCT GCGGCCGCAG GCGTGGCTTC GCCGATCGCG ATCGTCGTCG CCGCGATCGC CGTTCTGCTC AAGCTCAACA GCCTGGTCGA GTTCACCAAG GTGATACCGA GTGCCGGGTC GTACGTGTCC TACATCGCCA AGGCGTTCGG CGGTCGGGTG GGTGTGGTCA CCGCGTGGGC CCTCGGGTTC GGCTACATCG TCGCGGTCGG CTACGTGATG GCGGTGATGG GTGGCTTCAC CTCCCAGGTG ATCCAGCAAT ACCTGCACGT CCACGTGCCC TGGCAACCGA TCGCGGTCGT CTTCGTGGTG CTCGTGTCCT ACCTCGTCTA TCGAGGCGTC ACCATCAGTG CACGCTGGGC AAGCGCCTCG TTCGCGTTCG AACTCGCGCT GATCGTCGTA GCCATGATTG CCATCGTTGT CCACTACCAC AACCAGCTCT CGCTCGTGAG CCTCGATCCC GCCAAGATCT CGCGGGGCAT CTCGGGTCTC GGGCTCGCCT TCCCGCTGGC GGTGTTCCTC TTCATCGGCG TCGGGAATCC GGGTGCGATG GTGGAGGAGA CGCGTGATGC GCGCCGGAGC GTTCCGCGAG CGATCTACAC AGCGGTCATC GTTGCCACCA TCATCTACGT CCTCATGGCG GTGACGACGT CGATCGCGTT CCACAACGAT CCGACGACCA TCGGCAACCT TGCCGCGCCC TTCGTGACGG CGGCGAGCCA TGCACTCGGG CCCTTTGCGA TCCTCGTCTA CCTGGCCGGC TTGACCAGCA CGTTCTCGTC GCTGCTCGGG GCGACGACGG CGCAGACACG GATCTTGTTC AGCGCGGGGC GCGACGGCAT GTTGCCACGA GGTCTCGCGC GCCTCTCCTC GCGGCACCAG ACCCCGGTGA GCGCGCTCGC GGTGTACTGG ATCGGGGCCG GGGTCATGAC CTTGATCTGG GCCAGCACCG GCAACCCGCT GGTGCTTGCC GGTGACATCG CCACCCTCGG AACCATCCCG ATCGCGCTGA CCTACCTCGC GCTCAACATC GCACTGCCGG TGTACTACCT GCGCTTCCAC CGCGAGGCGT TCGCCCCGCT GCGCCATCTC GTGATCCCTG TCCTTGGCGT TGCCTCGCTC ATCTTGCCGC TGTGGGGCCT GATCAAGCCT GGTCAGCCCT ACCCGTTCAA CGTGTTCCCC TACATCGCAC TCGCGGTGAT CGCGATCGGT GTGGTGGTCT CGCTCGCCAC GGGTCATCGT GTCCGGCCGC TTGCCGAGGC ACCGTTCGAT CCGCTCGCTG AGGCCACCGA CTGA
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Protein sequence | MTTVPSGDGD TASGHPRLRH NALGVGDILG VSLADTAPAM SFFFSFAAIA AAAGVASPIA IVVAAIAVLL KLNSLVEFTK VIPSAGSYVS YIAKAFGGRV GVVTAWALGF GYIVAVGYVM AVMGGFTSQV IQQYLHVHVP WQPIAVVFVV LVSYLVYRGV TISARWASAS FAFELALIVV AMIAIVVHYH NQLSLVSLDP AKISRGISGL GLAFPLAVFL FIGVGNPGAM VEETRDARRS VPRAIYTAVI VATIIYVLMA VTTSIAFHND PTTIGNLAAP FVTAASHALG PFAILVYLAG LTSTFSSLLG ATTAQTRILF SAGRDGMLPR GLARLSSRHQ TPVSALAVYW IGAGVMTLIW ASTGNPLVLA GDIATLGTIP IALTYLALNI ALPVYYLRFH REAFAPLRHL VIPVLGVASL ILPLWGLIKP GQPYPFNVFP YIALAVIAIG VVVSLATGHR VRPLAEAPFD PLAEATD
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