Gene Afer_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1024 
Symbol 
ID8323088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1051923 
End bp1052729 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content69% 
IMG OID644952151 
Productglycosyl transferase family 2 
Protein accessionYP_003109635 
Protein GI256371811 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.708512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGTCA CACCCGACGT GCGCAGCGCA GCCTTCGACC CGGATGACGC CATCGACCGC 
CTCGTCCTCG CACGCTTCGA CGACGACAAC CCGAGGTTGC CCGAGGCGGC AGTCATGGTG
GTCATCCCCG CATTCGACGA GGAAGCCACC ATCGCCGACG TCATCCGGCG CGTGCCCCGA
CAGCTCGCCG GCTCACCACC GCTCGTCGTC GTCGTGTCCG ATGGTTCCCG AGACGCCACC
GTCGACGTGG CACGCCGCGA AGGTGCGCTC GTCCTCGACG TCCCGATCAA CCGCGGCCAA
GGCGCTGCAC TCCGTCTCGG TTACCTCCTC GCGATCCGTC GGGGCGCACG CATCGTCGGC
ATCGTCGACG CCGATGGCCA GTGGGACCCA GCCGACCTTG CGACGGGCGT GGATCTCGTC
GATCACCACG TCGCCACGTT CGCACAAGGC TCACGCCGAC TCGGCACGAG CACGGTGGGC
GACCCCATCC GCGACCTTGG CGTTCGAGTC TTCTCGCTCG TCGTGTCCGC GCTCATCGGT
CAGCGGGTCG GGGACACGTC ATCGGGTATC CGCGTCATCG CGGCCGAGCT CCTCGGACGG
CTCCGGCTCG ACCAGCCCCA GTACCAATCC GCCGAACTCC TCCTCGCCGC AGCGTTCGCC
GGCGCAACGA TCGTCGAGTT CCCTGTCACG ATGGTCGCTC GCCGCGCCGG CACCTCGAAG
AAGGGCCGCA ACTGGCGCTA CGGCCTGCGC TATGGGCGCG TGGTGGCGCG TACCTATCTT
CGTGAGCGAT GGATCGCGCC GCGCTGA
 
Protein sequence
MRVTPDVRSA AFDPDDAIDR LVLARFDDDN PRLPEAAVMV VIPAFDEEAT IADVIRRVPR 
QLAGSPPLVV VVSDGSRDAT VDVARREGAL VLDVPINRGQ GAALRLGYLL AIRRGARIVG
IVDADGQWDP ADLATGVDLV DHHVATFAQG SRRLGTSTVG DPIRDLGVRV FSLVVSALIG
QRVGDTSSGI RVIAAELLGR LRLDQPQYQS AELLLAAAFA GATIVEFPVT MVARRAGTSK
KGRNWRYGLR YGRVVARTYL RERWIAPR