Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1024 |
Symbol | |
ID | 8323088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1051923 |
End bp | 1052729 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644952151 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003109635 |
Protein GI | 256371811 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.708512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCGTCA CACCCGACGT GCGCAGCGCA GCCTTCGACC CGGATGACGC CATCGACCGC CTCGTCCTCG CACGCTTCGA CGACGACAAC CCGAGGTTGC CCGAGGCGGC AGTCATGGTG GTCATCCCCG CATTCGACGA GGAAGCCACC ATCGCCGACG TCATCCGGCG CGTGCCCCGA CAGCTCGCCG GCTCACCACC GCTCGTCGTC GTCGTGTCCG ATGGTTCCCG AGACGCCACC GTCGACGTGG CACGCCGCGA AGGTGCGCTC GTCCTCGACG TCCCGATCAA CCGCGGCCAA GGCGCTGCAC TCCGTCTCGG TTACCTCCTC GCGATCCGTC GGGGCGCACG CATCGTCGGC ATCGTCGACG CCGATGGCCA GTGGGACCCA GCCGACCTTG CGACGGGCGT GGATCTCGTC GATCACCACG TCGCCACGTT CGCACAAGGC TCACGCCGAC TCGGCACGAG CACGGTGGGC GACCCCATCC GCGACCTTGG CGTTCGAGTC TTCTCGCTCG TCGTGTCCGC GCTCATCGGT CAGCGGGTCG GGGACACGTC ATCGGGTATC CGCGTCATCG CGGCCGAGCT CCTCGGACGG CTCCGGCTCG ACCAGCCCCA GTACCAATCC GCCGAACTCC TCCTCGCCGC AGCGTTCGCC GGCGCAACGA TCGTCGAGTT CCCTGTCACG ATGGTCGCTC GCCGCGCCGG CACCTCGAAG AAGGGCCGCA ACTGGCGCTA CGGCCTGCGC TATGGGCGCG TGGTGGCGCG TACCTATCTT CGTGAGCGAT GGATCGCGCC GCGCTGA
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Protein sequence | MRVTPDVRSA AFDPDDAIDR LVLARFDDDN PRLPEAAVMV VIPAFDEEAT IADVIRRVPR QLAGSPPLVV VVSDGSRDAT VDVARREGAL VLDVPINRGQ GAALRLGYLL AIRRGARIVG IVDADGQWDP ADLATGVDLV DHHVATFAQG SRRLGTSTVG DPIRDLGVRV FSLVVSALIG QRVGDTSSGI RVIAAELLGR LRLDQPQYQS AELLLAAAFA GATIVEFPVT MVARRAGTSK KGRNWRYGLR YGRVVARTYL RERWIAPR
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