| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1002 |
|---|
| Symbol | |
|---|
| ID | 8323066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1023549 |
|---|
| End bp | 1024637 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644952129 |
|---|
| Product | biotin/lipoate A/B protein ligase |
|---|
| Protein accession | YP_003109613 |
|---|
| Protein GI | 256371789 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0095] Lipoate-protein ligase A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGAC CCGTTCGCAT CATCGTCGCC ACCGGCCTCG AGGCCATCGA CTCCCAGGCG
ATCTACCACG CCCTCGCCGA GAGGCTCGGT CCCGACGACC CCGACACCAT CTGCCTGGTG
TCACCGCGAG ACCCCTACGT GTGCGTCGGC TACCACCAGG CGGTCGAACG AGAACTCGAC
GTCGAAGCGG CCGCGGCGCG CGGCCTACCG ATCACGCGGC GCATGGTCGG CGGGGGCGCC
GTGTACCTCG ACGCTGGTCA GCTGTTCGTC CAGTGGATCA TGCACCCAGA CCACGTACCG
CTCTCGCTGG AGGCACGCTA CGCGGCCTAC ATTGCGCCAC TCGTGACGAC GCTGCGTGCC
TTCGGGATCG ACGCGCGCCA TCGCCCGGTC AACGACATCC ACGTCGCCGA CCGCAAGATC
GGCGGCACCG GTGCGGCTCG CATCGCGGGC GCCGAGGTGC TCGTGGGTTC GTTCATCCGC
ACGATCGACA CCGACGCCCT CGCCGCCGTG CTGCGCGTCG ACTCCGTGAA GCTCCGCGAC
AAGCTCGCCG CCACGATGCG CACCTACGTC ACCTCCATGG AGCGCGAGCT CGGATCGGCA
CCGTCGGAGG ACGCCATCGT CGAGCGCTAC CTCCCGATCC TCGCCGAGGC ACTCGGACGC
CCACTCGAAC TCGGCACCTT GAGCGAGGAC GAGCGCCGCC ACGTCGCCGC GGTGCGCGAA
CGACTCGTCG ATCCCGCCTG GGTCAACGAT GGCGGGGGGC GGCGCGTCCT CGGGGTGCAC
ATTCGCGAAG GTGCCGACGT CCTCGTCGGC CGCACCAAGG CACCGAGCGG GCTCGTGCGG
ATCCTCCTCG TCGTCGCCGA GGGCCACGTG ATCGACGCCA CCGTCGAGGG GGACTTCACC
GTCTGGCCCA TGGAGGCACC GCGCGAGATC GCCGATGCCC TGATCGGCCA ACCGGCCGAT
CCCGCGGCTC TCGCGAGGGT TGCCGAGGAG GCCGGTGATC GAACGCTCGA CGACGCTCCT
GGCCTCGCCG GCGTCCATCT GCGCGAGGCG GTCGAGGACG CCTTCTCCTT GGAGACCCAC
CAGTCCTGA
|
|---|
| Protein sequence | MTRPVRIIVA TGLEAIDSQA IYHALAERLG PDDPDTICLV SPRDPYVCVG YHQAVERELD
VEAAAARGLP ITRRMVGGGA VYLDAGQLFV QWIMHPDHVP LSLEARYAAY IAPLVTTLRA
FGIDARHRPV NDIHVADRKI GGTGAARIAG AEVLVGSFIR TIDTDALAAV LRVDSVKLRD
KLAATMRTYV TSMERELGSA PSEDAIVERY LPILAEALGR PLELGTLSED ERRHVAAVRE
RLVDPAWVND GGGRRVLGVH IREGADVLVG RTKAPSGLVR ILLVVAEGHV IDATVEGDFT
VWPMEAPREI ADALIGQPAD PAALARVAEE AGDRTLDDAP GLAGVHLREA VEDAFSLETH
QS
|
|---|
| |