Gene Afer_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0987 
Symbol 
ID8323051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1007180 
End bp1007752 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content64% 
IMG OID644952115 
ProductCRISPR-associated protein, Cse2 family 
Protein accessionYP_003109599 
Protein GI256371775 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAA CTTCGTCGAC CTCGACGAAC GACACACTGT TCCGTCAGGT ACGTGACATG 
ATCGCCCGAG ACCCGGGAGC GCTCGCGACG CTTCGCCGCA ACGTCGGCCG GAGCTTTGAC 
GAGTCCCCTG ACTCTTGGCC GTACGTCCTC ATGGTGACGG GACGCTCGCG CTGGCGTGAG 
CCGGCTGCGC ACCTCGCGCT CGGTCTCTTC GCGTTGCACC ACCAATCGAA GACGCCTGGC 
GCCCTCGACA AGGAAGGCTC GACCTTCGGG CTCGCAACTC GGAGATTGCG AACCTCTCGC 
GGCGATAGCG GCGCATCCGA GCAAGGGATA GAACGGCGCT TCCGGAGCGC GCTCGCGAGC 
GAGACCATCG ACGCCCTCGG CGTTCACCTT CGGGGACTGG TCACGCTCAT GCGCGGTGCG 
GACGTGTCCC TCGACTATCC CCGGCTCTAC CAAGATCTCA GTACCTGGCT CCTGCCCGAG 
AAACTACAGA GAGTCAGCCT GAGATGGGCA CGAGACTACT ACGCGCTCGA CCCTGACCAG 
CAATCACCCG CCGAACAGAA GGAGGAACCA TGA
 
Protein sequence
MTTTSSTSTN DTLFRQVRDM IARDPGALAT LRRNVGRSFD ESPDSWPYVL MVTGRSRWRE 
PAAHLALGLF ALHHQSKTPG ALDKEGSTFG LATRRLRTSR GDSGASEQGI ERRFRSALAS 
ETIDALGVHL RGLVTLMRGA DVSLDYPRLY QDLSTWLLPE KLQRVSLRWA RDYYALDPDQ 
QSPAEQKEEP