Gene Afer_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0984 
Symbol 
ID8323048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1004583 
End bp1005263 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content66% 
IMG OID644952112 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_003109596 
Protein GI256371772 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCTCA CTCGGCTCTA CATCGACCCA CAGAAGCAGG CTGCTCTCAG CGTTCTGCGG 
AACCCGCAGC GCATGCACGC GATCATCGCC CAAGCGACGT CGGCCAGTGT GCCGCAGGAG 
GCGAATTCGA TTGGCCGAAC GCTCTGGCGC GTCGACGGCG ACGACCCTCG GGTCCCGATT 
CTCTACGTGG TGAGCGCAGT CCAGCCGCAG TTCGCCCACT TCGCGGCGAG CGTAGGGCAA 
GTCGTCCGAG GCACGGACTA CGACACGAAG CCCTACGGGC CCCTCCTCGA TCGACTCGAG 
ACAGGCCAGG TCTACGCCTT CCGGCTCGCA GCCAATGCGG TGCGGAGCGG TCGGAGTTCG 
TCCGGATCCG CAGACACGAA GCGCCACGGC CACGTCACCA TCACACAGCA GCTCGGCTGG 
CTCCTTGCGC GGTCCGAGCA GCACGGTTTC ACGATCCGTA CCGGTTCGAC AGGCGAACCA 
GACGTGGCGG TGACAGGCGG TCGCCGGATG GTGTTCCGCA GGCAAGGCCA ACGAGTGACC 
ATCGCGTTGA CCGAGTTCAT GGGCCATCTC GAGGTTCTCG ACCGGGAGCT CCTTCGGCGC 
AGCTTGGTCA CCGGCATAGG CCACGCACGC GCCTATGGTT GCGGCCTGCT CACGCTTGCT 
GCACCAGCGA GACCCCGATG A
 
Protein sequence
MFLTRLYIDP QKQAALSVLR NPQRMHAIIA QATSASVPQE ANSIGRTLWR VDGDDPRVPI 
LYVVSAVQPQ FAHFAASVGQ VVRGTDYDTK PYGPLLDRLE TGQVYAFRLA ANAVRSGRSS 
SGSADTKRHG HVTITQQLGW LLARSEQHGF TIRTGSTGEP DVAVTGGRRM VFRRQGQRVT 
IALTEFMGHL EVLDRELLRR SLVTGIGHAR AYGCGLLTLA APARPR