Gene Afer_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0976 
Symbol 
ID8323040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp995142 
End bp995633 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID644952104 
Productputative NADH dehydrogenase 
Protein accessionYP_003109588 
Protein GI256371764 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.37557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGG ATGACGGCAC CCAGTCGATG GCGATGATCT GCTGGAGTTC CGATCTCGAT 
CGGGTCTGGC CGGTCTTGAT CCTCGCGACC ACGGCAGCCG CTTCCGGGCT CGAAGTGGAC 
GTGTTCTTCA CGTTCTGGGG TCTGCGAGTC CTGCAGCGGT CGGACGTTCG CATCACGGGT 
GAGAACTGGA AGCAGAAGCT CGAGTCATTG ATGGATCCGG GCTCGACCGA TCGCCTTCGA 
CTCGGGAAGT TGAACATGGG TGGCATGGGC ACGAAGATGA TCAAGATGCT GGCGGACGAG 
CACAAGGTGT CGTCGCCCAC CGAGCTCTTG GAGATGGCGC TCGATCTCGG CGTGCGCTTG 
CATCCGTGCC AGATGACGAT GGAGCTCTAC GGCCTGTCGA AGGACGACTT CATCGAGGGC 
CTGCAGCCTC CCATTGGAGC GGCAAGCTTC ATCAATATGG CTGCCGAAGC CGACATCACC 
CTGTTCATCT AG
 
Protein sequence
MAKDDGTQSM AMICWSSDLD RVWPVLILAT TAAASGLEVD VFFTFWGLRV LQRSDVRITG 
ENWKQKLESL MDPGSTDRLR LGKLNMGGMG TKMIKMLADE HKVSSPTELL EMALDLGVRL 
HPCQMTMELY GLSKDDFIEG LQPPIGAASF INMAAEADIT LFI