| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0968 |
|---|
| Symbol | |
|---|
| ID | 8323032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 988205 |
|---|
| End bp | 989518 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644952096 |
|---|
| Product | protein of unknown function DUF224 cysteine-rich region domain protein |
|---|
| Protein accession | YP_003109580 |
|---|
| Protein GI | 256371756 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.405818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCG GAGGGCGCAA GGTGGCGCCT CAGGTGGTCG AACTCGAGGA GGCCAGGGTC
ACCTCGACCA TCTCAGGCAG GGAGTGGGAC GTCTCGGGCG GCCCGAGTCG CATGCTGATG
CCGCGGGTGC TCACCGACTA CACCCAGCGC GGCTTCGAGG CGATCCGTGC GCTCGCCGGT
GGCGAGAGCC TCGAGTGGTG CTACGGCTGT GGCAAGTGCG TACCGGTGTG CCCGGTCGAT
CTCGTGGGCG AGTACGGGCC GCGCAAGCTC CACCGCATGG TCCAGACCGG GACGAACCTC
TTCGAGGCCG ATCAGCTCTG GATGTGCACG ACGTGCGGCA ACTGCCTGCG CGTGTGCCCG
AAGCAGGTCA ACATGATCCA GATCATGCCG GCGGTACGCG AAGTGGCGGT CGCCGACGGG
ACCATCCCGA CCGAGCTCCA AGGGGTCATG GAGAAGACCT TCCGCTACGG GAACGCCTTG
GGCGAGAATC CCCGGCGGCG CCATGCCTGG ACGAAGGGCG CGGGCGTCCC GGTGCGGGTG
CTCTCGCAGG ATCCGAGCCC GGTGGACGTG TTGTTCTACG TCGAGGACTA CTGGAGCTAC
CACCCGCGCG GACAGCAGGC GGCACAGGCG TTCGCGCGTG TGCTGAACGC GGCTGGGGTC
GACTTTGCGA TCCTCGGCGC CGAGGAGAAG ACCATCGGCG ACTCGCAGCG GCTCGCCGGC
GAGAAGGGGC TGTTCGAGGC CCTGATGGAG GACGTCGTGG CGACGCTCGA GCGCTACGAG
TTCCGACGCA TCGTCACGCC GGACCCGCAC GGCTTCAACG CGCTCGTGAA GGTGTACCCC
TCGTATGGGC ATCACTACGA GGTGCTCCAC TACACGCAGC TCCTCGCGCC GCTCATGTCG
TCACTCGAGC TGACGAACCC GATCGACGCG AAGGTGACGT TCCACGATCC GTGCTACCTC
GGGCGTCACA ACGGCGTCTA CGACGCCCCT CGCGAGGTGC TGCGAGCGAT CCCGGGGCTC
GAGCTGATCG AGATGGGTCG GTGCCGTGAG AACTCGTACT GCTGCGGTGG CGGTGGCGGC
GGCATGTGGC TCGACGGCTT CAACGGCAAC CACCTCTCGG AGCGCCTGTC GGAGCGACGG
GTGCGCGAAG CCGCGGCGAC CGGTGCGGAC ATCTTGGCTG TGTGCTGCCC GTACGAGGTG
TCGCGCTTCG AGGACGCCGC CAAGTCGACC GGGAACGAAC ATCTCCGCGT GCTCGACATC
GCCGAACTCG TGGACATGGC AATGGCGCCG GCGCTCGCTG GCCAGGTTGG GTGA
|
|---|
| Protein sequence | MPVGGRKVAP QVVELEEARV TSTISGREWD VSGGPSRMLM PRVLTDYTQR GFEAIRALAG
GESLEWCYGC GKCVPVCPVD LVGEYGPRKL HRMVQTGTNL FEADQLWMCT TCGNCLRVCP
KQVNMIQIMP AVREVAVADG TIPTELQGVM EKTFRYGNAL GENPRRRHAW TKGAGVPVRV
LSQDPSPVDV LFYVEDYWSY HPRGQQAAQA FARVLNAAGV DFAILGAEEK TIGDSQRLAG
EKGLFEALME DVVATLERYE FRRIVTPDPH GFNALVKVYP SYGHHYEVLH YTQLLAPLMS
SLELTNPIDA KVTFHDPCYL GRHNGVYDAP REVLRAIPGL ELIEMGRCRE NSYCCGGGGG
GMWLDGFNGN HLSERLSERR VREAAATGAD ILAVCCPYEV SRFEDAAKST GNEHLRVLDI
AELVDMAMAP ALAGQVG
|
|---|
| |