| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0956 |
|---|
| Symbol | |
|---|
| ID | 8323020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 977838 |
|---|
| End bp | 978986 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644952084 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_003109568 |
|---|
| Protein GI | 256371744 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.215548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAT CGCTCGCCCC CAGATCCCGC GGGACGACGT GGGCGCGCCT TCGCAGCTAC
GACGCGCTCC TGTGGTTGCT CGCCGCGGCC GTGGGCGTCT TCGGTGTCGT GATGGTGTAC
TCGGCGACCC GGAACCAACT GGAACTTGCT GGCCTCTCGC CGCACTACTA CCTCGATCGT
CAGGCGATCT TCTGGGTGCT CGGGCTGATC GTGATGAGCG TCGTCGCCGC GCTCGATCTC
GAGTGGCTCG GTCGTCTCGG CTACTGGATC TACGGTGCGG TGCTGCTCGG CCTCGTGGCC
GTGTTGTCGC CGGTCGGGTC GTCGGCGCTC GGGTCCCAGC GGTGGTTCCA GCTCGGCCCG
ATCCAGGTGC AGCCGTCGGA GTTCGCACCC ATCGGCGTGA TGTTCGGTAT CGCGGCCTAT
CTCTCGGGAC GCGATGGACC GCGGACGTGG CGCGAGGTGG CCGTGGTCCT CGCGCTCGGG
GGTGTGCCGG CACTGCTCGT GGTGAAGCAG CCGGACCTCG GCACCGGCAT CGTGGTCGGT
ATCGTCACCA TGGTGCTCCT CGTCATGGGT GGCGCCACCG GTCGTCAGCT CCTCGTGATC
CTGGTTGCCG GGGTGCTCGG GATCATCGCC GTCGTGCACC TCGGTCTGCT GAAGCACTAC
CAGCTCGAGC GGCTCCTCTC GTTCGTGAAC CCGCAGTCGG CGACCCAGAC CTACGGCTAC
AACCTGGTCC AGTCGAAGAT CGCCATCGGT TCGGGGCACA TCTTCGGCAC CGGCCTCTTC
AAGGGGAGCC AAACGAACCT CGCCTACGTT CCCGAGCAGC AGACCGACTT CATCTTCACG
GCGGTGGGCG AACAGCTCGG CTTCATCGGT GCCGGTTCGC TCGTGCTGGT GTACGGCATC
ATGCTGGCCA GGTCGTATCG GGTGCTGCGT TCGGCGGCGG ATCGAGTCTC CATGCTGCTC
GTCGCCGGCG CGATCGCGTG GATCGGATTC TCGGTGTTCC AGAACATCGG CATGACGATC
GGCATCATGC CCATCACCGG GATCCCGTTG CCGTTCGTCT CCTACGGCGG CTCGGCGATG
CTCGGCTTCT CCTCGGCGGT GGGCATCGTG CTCTCTGCCG GGTCGAGGCG ACTGCGACGT
GCCAGCTGA
|
|---|
| Protein sequence | MATSLAPRSR GTTWARLRSY DALLWLLAAA VGVFGVVMVY SATRNQLELA GLSPHYYLDR
QAIFWVLGLI VMSVVAALDL EWLGRLGYWI YGAVLLGLVA VLSPVGSSAL GSQRWFQLGP
IQVQPSEFAP IGVMFGIAAY LSGRDGPRTW REVAVVLALG GVPALLVVKQ PDLGTGIVVG
IVTMVLLVMG GATGRQLLVI LVAGVLGIIA VVHLGLLKHY QLERLLSFVN PQSATQTYGY
NLVQSKIAIG SGHIFGTGLF KGSQTNLAYV PEQQTDFIFT AVGEQLGFIG AGSLVLVYGI
MLARSYRVLR SAADRVSMLL VAGAIAWIGF SVFQNIGMTI GIMPITGIPL PFVSYGGSAM
LGFSSAVGIV LSAGSRRLRR AS
|
|---|
| |