Gene Afer_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0883 
Symbol 
ID8322947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp904289 
End bp904900 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID644952017 
Productglycerol-3-phosphate responsive antiterminator, GlpP 
Protein accessionYP_003109501 
Protein GI256371677 
COG category[K] Transcription 
COG ID[COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGAGA CCCCACGTGC GATTCTCGCC ATCCGCGATC CTGAGCTCGC CCAGGCTACG 
ACCGCTGGGC TCGCGCCTGG GTGGGTGATG CTGCTCGGAG GGCCGGCCGC GAGCGTGATC 
GATGCCTCCA TGACCCTCTC GCTCGAGGGC TGGGTCGTGT TCGTCCACAT CGACATGGTG 
CGCGGTCTCG GGCGCGACGC CGACGGCCTC GGGGTGCTCT CGCGCTTCGG CGCACCCCAG 
GGCGTGATCT CGACGCATCC GAGCGTGGTG CAGGCGGCAC GGGATCTCGG GTTCGCCACC 
TCCCTGCGGA TCTTCCTGGT GGACTCGGGC TCGTTACGCT CGGGGATCCA ACAGGCACAG 
CGCACCAAGC CGGACTTCGT CGAGATCCTC CCGGGTGTGC TGCCGCACCT CATCGCGCCG 
GTGGCTCGAG CGACGGGGCT CCCGGTGATC CCTGGTGGGC TGATCACGAC TCCAGCGGAT 
GCGTGGGCGG CCATCGAAGG CGGTGCGCTC GCGATCTCGA CGTCGTCGCT CGAGGTCTAT 
CGGGCGGTAG TGGAGGCGCC GGCTCCCCTG GCGCACGAGA ACCACGTGCA GCGCTCGAGG 
GGTCACCGAT GA
 
Protein sequence
MTETPRAILA IRDPELAQAT TAGLAPGWVM LLGGPAASVI DASMTLSLEG WVVFVHIDMV 
RGLGRDADGL GVLSRFGAPQ GVISTHPSVV QAARDLGFAT SLRIFLVDSG SLRSGIQQAQ 
RTKPDFVEIL PGVLPHLIAP VARATGLPVI PGGLITTPAD AWAAIEGGAL AISTSSLEVY 
RAVVEAPAPL AHENHVQRSR GHR