Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0816 |
Symbol | |
ID | 8322879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 829765 |
End bp | 833292 |
Gene Length | 3528 bp |
Protein Length | 1175 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951950 |
Product | cobaltochelatase, CobN subunit |
Protein accession | YP_003109435 |
Protein GI | 256371611 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCA CGGTCGCGAC GAACGCCGAC ACCGAGGTGC TTGCGCTGCG CATGGCCTGG GAGGATCTCC CCTCGACCAT CGAGCTCCAC GTCGCCGCGC TCGGCGAGCT GCTCGAGACC TGGCATCCCA TCGAGGGCGA CGTGCTCGTC GTGCGCGCGC TCGGCGGGAT CGCGGCGGTG CCCGACCCGG CACAGCTCGC GACCAGGGCA CGCGCTGGAG GAGCTCACCT CGTCGTCCTT CCGGGCGAGG CGACCTTCGA CGTACCGACG GCACAGGCTT CCACGGTGCC GATGGCCGTC GTGGAGCGCG CCTTCGCCTA CGCCCGTGAG GGGGGTGCTG CCAACCTCGC GTCGCTCTGT CGCTACCTCG CCGTCCGGCT CGGCGGTGTC GAACTCGACG TCGCAGAGCC GGTGAGTATC CCGTTCGTCG GGAGCATGGG CCACACGTCC TGGTGCGAGC GTCATAGCGG GCCGCGCATC GCGGTCGTGG TCTATCGCGC CCATCTCATC GCCGGCAACA CGCAGTTCGT CACCGATCTC CTCGACCTCG CCGAGCAGAC GGGCGTCGCG CTCGAGGCCT GGTGGGCCTA CTCCGCACGC GGAGAGGCGG GTCAGGTCCT CGCGGCCGAG CTCGAGGCGT CCGGTGTCGA CGTCGTCATC ACCACGGTGC TCGCGGGCGG CGAGACCGAG GGGCTCGGTT GGGATGCGGG TCCGCTCGGC GGGCTCGACG TGCCGGTCGT CCAGGCGCCG ATCTCGACCG TGTCGCGGCA GGAGTGGGCG GCCTCTGCTA TGGGTCTCGT CCCGTTGGAC GTCGCCATGT CGGTTGCGAT TCCCGAGTAC GACGGTCGGA TCATCGCGGT GCCGATCGCC TACAAGGAGC TGATCGATGC CGACGAGGTC TTCGGGGCGC CGGTGCACGC CTATCGCCTC GATCGCGAGC GAGCGCATCG TGTCCTCGAA CTTGCTCGCC GCCTCGGTGC GCTGCGCCGT CGCGCCAACG ACGCCAAGCG CGTGGCCATC GTGCTGTCGG CGTACCCGAC CAAGCGCTCC CGCATCGGTA ACGCCGTGGG TCTCGACACG CCCCAGAGTC TCGTGCGCCT GCTGTCGATG CTCGCGGAGC GGGGTTGGCG GCTCGAGACC CCCGACGATC CCGACGCACT CATGGCGCGC CTTGGTGCGT TGCTCGATCC CGAGGCCCCG AGCGAGCGTG CTCGCGGAGG CGCGACCCTC TCGATCGATG CCTACCTGGC GTGGTACGCG ACGCTCCCCG GTGAGCTCCG CGACGAGGTC GAGGCGGCCT GGGGGCCGCC GCCGGGCTCG CGCTACATCG CGGAGGGATC GTTGTGGTTC CCCGCGATCT GGATGGGCGA TGCGCTCGTT GCGATCCAGC CTCCTCGCGG CTACGGCGAG CACGAGATCG CGATCTACCA TTCGCCCGAG CTCCCGCCGT CGCATCACTA CCTGGCCTTC TACCACTACC TCACGGCGGT TGCTGGCGTC GACGCCGTCG TGCACCTCGG CAAGCACGGC ACGCTGGAGT GGTTGCCGGG CAAGAGCGTC GGGTTGTCGT CGTCGTGCTG GCCGGACGTC GCGCTCGGCT CGGTGCCCCT CGTCTACCCG TTCGTGGTCA ACGACCCAGG TGAGGGCGTG CAGGCGAAGC GTCGGAGCCA CGCGGTGATC GTGGACCACC TCGTACCGCC GCTCACCCGA GCCGACAGCT ACGGAGCCAT CGCCGATCTC GAGTCGCTGC TCGACGAGCA CCAGCGGGTC GCGGCCCTGG ACCCATCGAA GCTCCCCGAG CTGCGAGCGG CGATCTGGTC GCTGCTCACC GAGTCGCGCA TCCACGAGGA CCTCGGTATC GACGAGGCCC CGAGCGTGCG CGACGACGCC TTCGACGACC TGCTGCTCGA CGTCGACGGC TACCTGTGCG AGCTCAAGGA CGCCACGATC CGTGGTGGCC TCCACATCCT GGGCGCGCCA CCGGTCGGCG AGGCACTCGT CGATCTCGTG GCCCAGATCG TTCGGGTGCC GCAGTTGGAC GTGCCGAGCC TTGCCGAGGA GCTCGATCGC CTCGAAGGCC GTCTCGGCGA CGGGAGCCGT GCGGCGCGCG ACGCCTCTGA CGGGCGCCTC CACGAGATCC TGTGGGCCCT CGCCGAGCGC GATTGGGATC CGGAGGTGCT CGATGACGCC GAGTGGTGTG CGAGCGTCGG TCTTGAGGCC GCCCCGGACG ACCTGCGTAC GGCGCTCGCC TGGGTCGCCG GATCGCTGGT GCCGAGGATC CGCGGGGCGA GCCGAGAGCT CGCGGCCGTT GCGGACGCAC TCGAGGGGCG GCCGATCGCA CCCGGTCCGG CTGGTGCGCC GTCTCGAGGG ATGGCGCACG TCTTGCCGAC TGGTCGGAAC TTCTACGGGC TCGATCCACG AGCGGTGCCG AGTCGGCTCG CCTGGCGTAC CGGCCAGCGT GCGGCAGCCG CACTGTGCGA GCGCTTTCGA CGCGACAGCG GCGGCGAGCT CCGTCACGCG AGCATCGTGC TCTGGGGTAC CGCGGCGATT CGGACCGGTG GTGACGACGT CGCGCTCGCC CTCGCGCTGC TCGGGGTGGA GCCACGATGG GACGCGATCT CGGGCCGTGT GGTCGGCCTC GAGCTCGTGC CGCTCGAACG GCTCGGCCGA GCGCGTGTGG ATGTGACCGT GCGGATCTCT GGGCTGTTCC GCGATGCCTT CGCCCACGCC ATTGCGCTCA TCGACGAGGC CGTCGAGTTG GTCGCCAAGG CAGCCGACGA GGGCGATGCG AACCCGGTGG CTCAGAGCGG GGCGGGCCCT CGCATCTTCG GCCCACCGCC GCGTGCCTAT GGTTCGGGGG TGCTCGAGCT GATCGAGCAC GGGGCATGGG AGAGTTCGGC AGATCTCGGG CGCACATGGG TGCGCTGGTC GCAGCATGCC TACGGGCGCG GGCGCAGCGG CGAGGAGGCG ACTGGGGCGC TCTGGGATCG ACTTCGTAGC GTCGAGGCGA TCGTGAAGGC GCAGGACAAC CGGGAGCACG ACATCTTCGA CTCCGACGAC TACCTCCAAG AGCACGGCGG GATGATCGCC GCGGCGCGCG CAGCCGGCAA CGTCTCGGTT CGGGGCTACT TCGGTGACAC CTCGCGACCG GATGCACCCA CGGTCAGGAG CATCGAGGAG GAGGCTGCGC GGGTCGTCCG TCAGCGGGTC GTGAACCCGA AGTGGCTCGA GGGGATGCGC CGTCACGGCT ACAAGGGCGC GTTCGAGATG GCGGCGACGG TCGATTATCT CTTCGGCTAC GACGCGACCG CCGGGGTCGC GCGCGACTGG ATGTACGACG CGGTGACGGA TGCGTTCGTT CGCGATCGCG AGAACCGATC GTTCCTGCTG CGCGTGAACC CCTCGGCGCT CGGGGCGATC TGTGCGCGCT TGCTCGAGGC CGCTCGGCGC GGCCTGTGGC ACGCCGACGA CGAACGCCTG GCTGCGCTCG CGGAGGGCAG CCTCGAGGCA GAGGGGGCCG AGGAGTGA
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Protein sequence | MRITVATNAD TEVLALRMAW EDLPSTIELH VAALGELLET WHPIEGDVLV VRALGGIAAV PDPAQLATRA RAGGAHLVVL PGEATFDVPT AQASTVPMAV VERAFAYARE GGAANLASLC RYLAVRLGGV ELDVAEPVSI PFVGSMGHTS WCERHSGPRI AVVVYRAHLI AGNTQFVTDL LDLAEQTGVA LEAWWAYSAR GEAGQVLAAE LEASGVDVVI TTVLAGGETE GLGWDAGPLG GLDVPVVQAP ISTVSRQEWA ASAMGLVPLD VAMSVAIPEY DGRIIAVPIA YKELIDADEV FGAPVHAYRL DRERAHRVLE LARRLGALRR RANDAKRVAI VLSAYPTKRS RIGNAVGLDT PQSLVRLLSM LAERGWRLET PDDPDALMAR LGALLDPEAP SERARGGATL SIDAYLAWYA TLPGELRDEV EAAWGPPPGS RYIAEGSLWF PAIWMGDALV AIQPPRGYGE HEIAIYHSPE LPPSHHYLAF YHYLTAVAGV DAVVHLGKHG TLEWLPGKSV GLSSSCWPDV ALGSVPLVYP FVVNDPGEGV QAKRRSHAVI VDHLVPPLTR ADSYGAIADL ESLLDEHQRV AALDPSKLPE LRAAIWSLLT ESRIHEDLGI DEAPSVRDDA FDDLLLDVDG YLCELKDATI RGGLHILGAP PVGEALVDLV AQIVRVPQLD VPSLAEELDR LEGRLGDGSR AARDASDGRL HEILWALAER DWDPEVLDDA EWCASVGLEA APDDLRTALA WVAGSLVPRI RGASRELAAV ADALEGRPIA PGPAGAPSRG MAHVLPTGRN FYGLDPRAVP SRLAWRTGQR AAAALCERFR RDSGGELRHA SIVLWGTAAI RTGGDDVALA LALLGVEPRW DAISGRVVGL ELVPLERLGR ARVDVTVRIS GLFRDAFAHA IALIDEAVEL VAKAADEGDA NPVAQSGAGP RIFGPPPRAY GSGVLELIEH GAWESSADLG RTWVRWSQHA YGRGRSGEEA TGALWDRLRS VEAIVKAQDN REHDIFDSDD YLQEHGGMIA AARAAGNVSV RGYFGDTSRP DAPTVRSIEE EAARVVRQRV VNPKWLEGMR RHGYKGAFEM AATVDYLFGY DATAGVARDW MYDAVTDAFV RDRENRSFLL RVNPSALGAI CARLLEAARR GLWHADDERL AALAEGSLEA EGAEE
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