Gene Afer_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0816 
Symbol 
ID8322879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp829765 
End bp833292 
Gene Length3528 bp 
Protein Length1175 aa 
Translation table11 
GC content70% 
IMG OID644951950 
Productcobaltochelatase, CobN subunit 
Protein accessionYP_003109435 
Protein GI256371611 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases 
TIGRFAM ID[TIGR02257] cobaltochelatase, CobN subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCA CGGTCGCGAC GAACGCCGAC ACCGAGGTGC TTGCGCTGCG CATGGCCTGG 
GAGGATCTCC CCTCGACCAT CGAGCTCCAC GTCGCCGCGC TCGGCGAGCT GCTCGAGACC
TGGCATCCCA TCGAGGGCGA CGTGCTCGTC GTGCGCGCGC TCGGCGGGAT CGCGGCGGTG
CCCGACCCGG CACAGCTCGC GACCAGGGCA CGCGCTGGAG GAGCTCACCT CGTCGTCCTT
CCGGGCGAGG CGACCTTCGA CGTACCGACG GCACAGGCTT CCACGGTGCC GATGGCCGTC
GTGGAGCGCG CCTTCGCCTA CGCCCGTGAG GGGGGTGCTG CCAACCTCGC GTCGCTCTGT
CGCTACCTCG CCGTCCGGCT CGGCGGTGTC GAACTCGACG TCGCAGAGCC GGTGAGTATC
CCGTTCGTCG GGAGCATGGG CCACACGTCC TGGTGCGAGC GTCATAGCGG GCCGCGCATC
GCGGTCGTGG TCTATCGCGC CCATCTCATC GCCGGCAACA CGCAGTTCGT CACCGATCTC
CTCGACCTCG CCGAGCAGAC GGGCGTCGCG CTCGAGGCCT GGTGGGCCTA CTCCGCACGC
GGAGAGGCGG GTCAGGTCCT CGCGGCCGAG CTCGAGGCGT CCGGTGTCGA CGTCGTCATC
ACCACGGTGC TCGCGGGCGG CGAGACCGAG GGGCTCGGTT GGGATGCGGG TCCGCTCGGC
GGGCTCGACG TGCCGGTCGT CCAGGCGCCG ATCTCGACCG TGTCGCGGCA GGAGTGGGCG
GCCTCTGCTA TGGGTCTCGT CCCGTTGGAC GTCGCCATGT CGGTTGCGAT TCCCGAGTAC
GACGGTCGGA TCATCGCGGT GCCGATCGCC TACAAGGAGC TGATCGATGC CGACGAGGTC
TTCGGGGCGC CGGTGCACGC CTATCGCCTC GATCGCGAGC GAGCGCATCG TGTCCTCGAA
CTTGCTCGCC GCCTCGGTGC GCTGCGCCGT CGCGCCAACG ACGCCAAGCG CGTGGCCATC
GTGCTGTCGG CGTACCCGAC CAAGCGCTCC CGCATCGGTA ACGCCGTGGG TCTCGACACG
CCCCAGAGTC TCGTGCGCCT GCTGTCGATG CTCGCGGAGC GGGGTTGGCG GCTCGAGACC
CCCGACGATC CCGACGCACT CATGGCGCGC CTTGGTGCGT TGCTCGATCC CGAGGCCCCG
AGCGAGCGTG CTCGCGGAGG CGCGACCCTC TCGATCGATG CCTACCTGGC GTGGTACGCG
ACGCTCCCCG GTGAGCTCCG CGACGAGGTC GAGGCGGCCT GGGGGCCGCC GCCGGGCTCG
CGCTACATCG CGGAGGGATC GTTGTGGTTC CCCGCGATCT GGATGGGCGA TGCGCTCGTT
GCGATCCAGC CTCCTCGCGG CTACGGCGAG CACGAGATCG CGATCTACCA TTCGCCCGAG
CTCCCGCCGT CGCATCACTA CCTGGCCTTC TACCACTACC TCACGGCGGT TGCTGGCGTC
GACGCCGTCG TGCACCTCGG CAAGCACGGC ACGCTGGAGT GGTTGCCGGG CAAGAGCGTC
GGGTTGTCGT CGTCGTGCTG GCCGGACGTC GCGCTCGGCT CGGTGCCCCT CGTCTACCCG
TTCGTGGTCA ACGACCCAGG TGAGGGCGTG CAGGCGAAGC GTCGGAGCCA CGCGGTGATC
GTGGACCACC TCGTACCGCC GCTCACCCGA GCCGACAGCT ACGGAGCCAT CGCCGATCTC
GAGTCGCTGC TCGACGAGCA CCAGCGGGTC GCGGCCCTGG ACCCATCGAA GCTCCCCGAG
CTGCGAGCGG CGATCTGGTC GCTGCTCACC GAGTCGCGCA TCCACGAGGA CCTCGGTATC
GACGAGGCCC CGAGCGTGCG CGACGACGCC TTCGACGACC TGCTGCTCGA CGTCGACGGC
TACCTGTGCG AGCTCAAGGA CGCCACGATC CGTGGTGGCC TCCACATCCT GGGCGCGCCA
CCGGTCGGCG AGGCACTCGT CGATCTCGTG GCCCAGATCG TTCGGGTGCC GCAGTTGGAC
GTGCCGAGCC TTGCCGAGGA GCTCGATCGC CTCGAAGGCC GTCTCGGCGA CGGGAGCCGT
GCGGCGCGCG ACGCCTCTGA CGGGCGCCTC CACGAGATCC TGTGGGCCCT CGCCGAGCGC
GATTGGGATC CGGAGGTGCT CGATGACGCC GAGTGGTGTG CGAGCGTCGG TCTTGAGGCC
GCCCCGGACG ACCTGCGTAC GGCGCTCGCC TGGGTCGCCG GATCGCTGGT GCCGAGGATC
CGCGGGGCGA GCCGAGAGCT CGCGGCCGTT GCGGACGCAC TCGAGGGGCG GCCGATCGCA
CCCGGTCCGG CTGGTGCGCC GTCTCGAGGG ATGGCGCACG TCTTGCCGAC TGGTCGGAAC
TTCTACGGGC TCGATCCACG AGCGGTGCCG AGTCGGCTCG CCTGGCGTAC CGGCCAGCGT
GCGGCAGCCG CACTGTGCGA GCGCTTTCGA CGCGACAGCG GCGGCGAGCT CCGTCACGCG
AGCATCGTGC TCTGGGGTAC CGCGGCGATT CGGACCGGTG GTGACGACGT CGCGCTCGCC
CTCGCGCTGC TCGGGGTGGA GCCACGATGG GACGCGATCT CGGGCCGTGT GGTCGGCCTC
GAGCTCGTGC CGCTCGAACG GCTCGGCCGA GCGCGTGTGG ATGTGACCGT GCGGATCTCT
GGGCTGTTCC GCGATGCCTT CGCCCACGCC ATTGCGCTCA TCGACGAGGC CGTCGAGTTG
GTCGCCAAGG CAGCCGACGA GGGCGATGCG AACCCGGTGG CTCAGAGCGG GGCGGGCCCT
CGCATCTTCG GCCCACCGCC GCGTGCCTAT GGTTCGGGGG TGCTCGAGCT GATCGAGCAC
GGGGCATGGG AGAGTTCGGC AGATCTCGGG CGCACATGGG TGCGCTGGTC GCAGCATGCC
TACGGGCGCG GGCGCAGCGG CGAGGAGGCG ACTGGGGCGC TCTGGGATCG ACTTCGTAGC
GTCGAGGCGA TCGTGAAGGC GCAGGACAAC CGGGAGCACG ACATCTTCGA CTCCGACGAC
TACCTCCAAG AGCACGGCGG GATGATCGCC GCGGCGCGCG CAGCCGGCAA CGTCTCGGTT
CGGGGCTACT TCGGTGACAC CTCGCGACCG GATGCACCCA CGGTCAGGAG CATCGAGGAG
GAGGCTGCGC GGGTCGTCCG TCAGCGGGTC GTGAACCCGA AGTGGCTCGA GGGGATGCGC
CGTCACGGCT ACAAGGGCGC GTTCGAGATG GCGGCGACGG TCGATTATCT CTTCGGCTAC
GACGCGACCG CCGGGGTCGC GCGCGACTGG ATGTACGACG CGGTGACGGA TGCGTTCGTT
CGCGATCGCG AGAACCGATC GTTCCTGCTG CGCGTGAACC CCTCGGCGCT CGGGGCGATC
TGTGCGCGCT TGCTCGAGGC CGCTCGGCGC GGCCTGTGGC ACGCCGACGA CGAACGCCTG
GCTGCGCTCG CGGAGGGCAG CCTCGAGGCA GAGGGGGCCG AGGAGTGA
 
Protein sequence
MRITVATNAD TEVLALRMAW EDLPSTIELH VAALGELLET WHPIEGDVLV VRALGGIAAV 
PDPAQLATRA RAGGAHLVVL PGEATFDVPT AQASTVPMAV VERAFAYARE GGAANLASLC
RYLAVRLGGV ELDVAEPVSI PFVGSMGHTS WCERHSGPRI AVVVYRAHLI AGNTQFVTDL
LDLAEQTGVA LEAWWAYSAR GEAGQVLAAE LEASGVDVVI TTVLAGGETE GLGWDAGPLG
GLDVPVVQAP ISTVSRQEWA ASAMGLVPLD VAMSVAIPEY DGRIIAVPIA YKELIDADEV
FGAPVHAYRL DRERAHRVLE LARRLGALRR RANDAKRVAI VLSAYPTKRS RIGNAVGLDT
PQSLVRLLSM LAERGWRLET PDDPDALMAR LGALLDPEAP SERARGGATL SIDAYLAWYA
TLPGELRDEV EAAWGPPPGS RYIAEGSLWF PAIWMGDALV AIQPPRGYGE HEIAIYHSPE
LPPSHHYLAF YHYLTAVAGV DAVVHLGKHG TLEWLPGKSV GLSSSCWPDV ALGSVPLVYP
FVVNDPGEGV QAKRRSHAVI VDHLVPPLTR ADSYGAIADL ESLLDEHQRV AALDPSKLPE
LRAAIWSLLT ESRIHEDLGI DEAPSVRDDA FDDLLLDVDG YLCELKDATI RGGLHILGAP
PVGEALVDLV AQIVRVPQLD VPSLAEELDR LEGRLGDGSR AARDASDGRL HEILWALAER
DWDPEVLDDA EWCASVGLEA APDDLRTALA WVAGSLVPRI RGASRELAAV ADALEGRPIA
PGPAGAPSRG MAHVLPTGRN FYGLDPRAVP SRLAWRTGQR AAAALCERFR RDSGGELRHA
SIVLWGTAAI RTGGDDVALA LALLGVEPRW DAISGRVVGL ELVPLERLGR ARVDVTVRIS
GLFRDAFAHA IALIDEAVEL VAKAADEGDA NPVAQSGAGP RIFGPPPRAY GSGVLELIEH
GAWESSADLG RTWVRWSQHA YGRGRSGEEA TGALWDRLRS VEAIVKAQDN REHDIFDSDD
YLQEHGGMIA AARAAGNVSV RGYFGDTSRP DAPTVRSIEE EAARVVRQRV VNPKWLEGMR
RHGYKGAFEM AATVDYLFGY DATAGVARDW MYDAVTDAFV RDRENRSFLL RVNPSALGAI
CARLLEAARR GLWHADDERL AALAEGSLEA EGAEE