Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0803 |
Symbol | |
ID | 8322866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 814215 |
End bp | 815426 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644951938 |
Product | Fumarylacetoacetase |
Protein accession | YP_003109423 |
Protein GI | 256371599 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.394865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGCCGC TGACGAGCTG GATCGACACG GATCTCGAGC ACGGCTACGG CCTCGACCAC CTGCCGCTGG GGGTGGACGC CGAGGGCGTG GTGGTGCGCA TCGGGGATGT CGCCCTACGG CTCGCGCCGC TCGTCGACGA CGGGTTGCTG AGGAGCGTGT CGCACGGGCT CGTTGCTGCA CGGACGCTCG GTCCGCTCTT TGCGGCCGGC TCGGCCACCA TGGCGCGACT GCGAGACGAG ATCGTGGTCC TCGCGAGCGG ACGCCCGGAC GACGCCGTCG CACGTCGGTT GGTCTCGATC GATGCGCTCG AGCTCTCTGT GCCGATACGA CCACGCACCT ACGTCGACTT CTACGCGTCC GAGGCCCACG CCACGAACGC CGGCAGGATC TTCCGTCCCG ACGGGGATCC GCTGCCGGCT GCGTGGCGTC GGCTCCCGAT CGGCTACCAC GGCCGTGCGT CCACCGTCGT CGTGTCAGGC ACCCCCATCG TGCGCCCCTG GGGTCTGCGC CGCGAGGGCG AGGGTGTCGT GCTCGGGCCG AGCGCGATGC TCGATCTCGA GGCCGAGGTG GGATTCGTCG TCGGACGCGC GAGCGAGCGT GGTCGGCCAG TGTCGGCCGG CGCGTTCGCG GAGATGGTCG GCGGCGTCGT GCTCGCGAAC GACTGGAGCG CTCGCGACAT CCAGGCGCTC GAGTCGTTCC CGCTCGGCCC CTTCGCCGGC AAGTCGTTCG CCACCAGCAT TAGCGCCTGG GTCACCCCAC TCTCGGCACT CGACGCAGCG CGGGTGACGC CGCCGGTGCA AGATCCGGCA CCGAGTGCCA ACCTCGTCGA TCCGGACCCA TGGTGCCTCG ATCTTCGGCT CGAGCTTCGC CTCAATGGAA CCGTCCTCAC GCGTCCGCCG GCCGCCACGA CCTACTGGAC CCCGGGCCAG CTCCTTGCAC ACCTCACCGA CAACGGTGCA CCCGTCGAGC CGGAGGATCT CTTCTGCTCT GGGACGGTGT CGGGCGCGGC GCCCGACGAG GTCGGTTCGC TGCTCGAGCT CACCTGGGGT GGGACGCGGC CCGTGCGCCT CGATGACGGG CACATGCGTA CCTGGCTCGT CGACGGCGAC GAGGTCACCA TCACGGCCAC GGCACCGGCC CTCGACGGCG GCTTCATCCG ACTCGGCGAG GTGACGGGCC GGGTGGTCTC GGCCATCGCG TCGCCTTGGT GA
|
Protein sequence | MAPLTSWIDT DLEHGYGLDH LPLGVDAEGV VVRIGDVALR LAPLVDDGLL RSVSHGLVAA RTLGPLFAAG SATMARLRDE IVVLASGRPD DAVARRLVSI DALELSVPIR PRTYVDFYAS EAHATNAGRI FRPDGDPLPA AWRRLPIGYH GRASTVVVSG TPIVRPWGLR REGEGVVLGP SAMLDLEAEV GFVVGRASER GRPVSAGAFA EMVGGVVLAN DWSARDIQAL ESFPLGPFAG KSFATSISAW VTPLSALDAA RVTPPVQDPA PSANLVDPDP WCLDLRLELR LNGTVLTRPP AATTYWTPGQ LLAHLTDNGA PVEPEDLFCS GTVSGAAPDE VGSLLELTWG GTRPVRLDDG HMRTWLVDGD EVTITATAPA LDGGFIRLGE VTGRVVSAIA SPW
|
| |