| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0789 |
|---|
| Symbol | |
|---|
| ID | 8322851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 799476 |
|---|
| End bp | 799994 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644951924 |
|---|
| Product | Iojap-related protein |
|---|
| Protein accession | YP_003109410 |
|---|
| Protein GI | 256371586 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
|---|
| TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.283554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGTCGC GCCCAACCGA ACGATCACGA CGAGGAGGCC CCATCATCGA CATCGCCGAC
AGCACCCTGC GCCCATTCCA CGACCCTGGT GTGAGCACCG ACCACGATCT TCACCGCCTC
CGGCTCTCCG ATCAGCGCAC GCACGCGCTC GCGATCGCCC GCATGGCCGA GGACAAGCAT
GCTGATGACG TCGTGGTCTT GGAAGTGGCG GAACTCACCG CGATCGCGAC GCACTTCATC
CTCGCGACGG CGCGAAATCC CCGCCTCGGC GCCTCGCTCG TCACCGATCT CGTTCGCCAG
ATCCGTCGCG ATCTCGGACT CCACCCACGC GTCGAAGGAC GCCCGGGAGA CCCCTGGGTC
GTCCTCGACT GCATGGACAT CGTGATCCAC GTCCTCGCAC CCGAGGCTCG CCAGTTCTAT
CAGCTCGAGC GCCTCTGGGC GGACGCACCG ACCATCGCGA CAGGCGCCGC AAGCGCGCCC
CTCGACGCGG ACGACGCTTC CGTCGCGCGG GTCGACTAA
|
|---|
| Protein sequence | MPSRPTERSR RGGPIIDIAD STLRPFHDPG VSTDHDLHRL RLSDQRTHAL AIARMAEDKH
ADDVVVLEVA ELTAIATHFI LATARNPRLG ASLVTDLVRQ IRRDLGLHPR VEGRPGDPWV
VLDCMDIVIH VLAPEARQFY QLERLWADAP TIATGAASAP LDADDASVAR VD
|
|---|
| |