| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0715 |
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| Symbol | |
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| ID | 8322775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 720319 |
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| End bp | 721077 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951850 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003109338 |
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| Protein GI | 256371514 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.345068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTGC GTGGATCGTC GGTGGTGGTT ACGGGAGGCG CCTCTGGTCT TGGGCTCGGG
GTCGCCGAGC GCTTGATCGG GCGAGGTGCC CATGTTGTGA TCGTCGACCG CAATGCGGAG
GCCGGGGCGG CCGTTGCTGC GCGACTGTCC GCCGAGTTCG TCGAGGCCGA CGTGACGGAC
GAAGAGCAAC TCGCTCGCGC GTTCGACCGG GCTGCAGCGT TGGGGCCAGT GCGTATGGGC
GTGGCGTGTG CGGGCATCGG AATTGCCGAG CGTGTCCTTG GCCGCTCGGG CGAGCCGCAT
CAGTTGGCGT CCTTCCAACG GGTCATCGGG GTCAATCTGA TCGGGACGTT CAACCTCCTC
CGGCTCGCGG CTCGCGCCAT CGGAGCGAGC GAGCCGGCCG ATGGCGAGCG CGGGGTGATC
GTGCTGACGG CGTCGATCGC GGCCTTCGAT GGCCAGATCG GCCAGATCGC CTATGCGGCC
TCCAAGGGCG GCGTCGTCGG CATGACGTTG CCGGCCGCAC GCGATCTCGC GAGCGCGCAG
ATCCGGGTCG TGACGATCGC GCCGGGCATC ATGGACACGC CGCTGCTCGG TCAACTTCCC
GAGGAGGTGC GCCGCGACCT CGGCGCGTCG ATTCCCTTCC CCAAGCGACT CGGCCAACCA
GCCGACTTCG CGCAGCTCGT CGAGGCGATC GCAGAGAACC ACTACCTCAA CGGTGAGGTC
ATCCGCCTCG ACGGCGCGCT GCGCATGCCG CCTCGATGA
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| Protein sequence | MELRGSSVVV TGGASGLGLG VAERLIGRGA HVVIVDRNAE AGAAVAARLS AEFVEADVTD
EEQLARAFDR AAALGPVRMG VACAGIGIAE RVLGRSGEPH QLASFQRVIG VNLIGTFNLL
RLAARAIGAS EPADGERGVI VLTASIAAFD GQIGQIAYAA SKGGVVGMTL PAARDLASAQ
IRVVTIAPGI MDTPLLGQLP EEVRRDLGAS IPFPKRLGQP ADFAQLVEAI AENHYLNGEV
IRLDGALRMP PR
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