Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0713 |
Symbol | aceE |
ID | 8322773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 717041 |
End bp | 719779 |
Gene Length | 2739 bp |
Protein Length | 912 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644951848 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | YP_003109336 |
Protein GI | 256371512 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.8227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCATCG ACGGCTTCGC ACATCAGATC CCCGACATCG ACCCCGACGA GACGGCGGAG TGGGTTGACT CCTTCAACGC ACTCGTCGAC GAGCGAGGTC GCCAGCGAGC CACCTTCATG CTGATGAAGC TGCTCGAAGC GGCGAGGGAG CGCCAGGTCG GCTTCCCCGC GACGGTCTCG ACACCCTACA TCAACACCAT CGCACCGGAG AACGAGCCAT GGTTTCCGGG GGACGAGGCC ATCGAGCGCA GGATCCGTGC GTTCATCCGT TGGAACGCCG CGGTGATGGT GACGAGAGCG AACCATGCCG CGGACGGCAT CGGCGGGCAC CTGTCGACGT ATGCGAGCTC GGCAGCTCTC TACGAGGTTG GCTTCAACCA CTTCTTCCGC GGTAAGGACA CCGAGTACCC CGGCGACTTC GTCTACTTCC AAGGACATGC TTCACCAGGT TTCTACGCCC GCGCCTTCCT CGAGGGACGC CTCACCGAGG CGCAGCTGAA TCACTTCCGC ATGGAGGTCG GTGGCCAGGG CCTGTCGTCG TATCCGCATC CGCGACTCAT GCCGGACTTC TGGGAGTTCC CCACGGTCTC GATGGGCCTC GGGCCCATCC AGGCGATCTA CCACGCGATG TTCAACCGCT ACATGGAGAA TCGCAAGCTC GCCCAGGCCG CTTCCAGTCG CATCTGGGCG TTCGTGGGCG ATGGCGAGCT CGACGAACCC GAAGCGGTGG GAGCGCTCGG TGTGGCCGGA CGCGAGCACC TCGACAACCT CATCTTCGTC GTGAACTGCA ACCTGCAGCG TCTGGACGGC CCAGTTCGGG GCAACGGCAA GATCATCCAA GAGCTCGAGG CGACCTTCCG CGGCGCCGGC TGGAACGTGA TCAAGGTGAT CTGGGGCTCG AAGTGGGACG AGCTCCTCGC CCGGGACGTC GACGGGGTGC TGCTGAACAA GATGAACACG ACGCCAGACG GCGACTTCCA GAAGCTCGCG ACCGAGTCGG GGGCCTACAT TCGCGAACAC TTCTTTGGAC CCGACCCACG CCTCCGTCGC CTCGTGGAGC ACCTCTCCGA CGAGGAGCTC CAGGCGCTCC CTCGTGGTGG ACACGACTAC CGAAAGCTCT ACGCGGCCTA CCACGCCGCG GTGAACCACA CGGGTTCACC CACCGCGATC CTCGCCAAGA CCATCAAGGG TTGGACGCTC GGCCCGGACA TCGAGGCGCG CAACGCAACC CACCAGATCA AGAAGATGAC CCGGGAGCAG CTCCTCGAGT TCCGTGATCG CCTCCACCTG AACGACGTGA TCTCGGACGA GATGCTTGCG GGCGAGGATC CGCCCTACAT CACGCTTCCT CCGGGCTCGA TCGAGGAGGA GTATCTCCAC ACACGGCGCC GCGTCCTCGG CGGCTACCTC CCGAAGCGCG TCGAACGCGC ACGGAGCCTC CCTGCGCCGA GCAGCGAGGC GTTTGCCGAG TTCTACGACG GCTCTGGCGC CCAAGCGGTG TCGACGACGA TGGTGATGGC TCGCATTCTG CGATCGCTCA TCAAGGACCC ACAGGTCGGA TCCCGTATCG CGCCGATCGT GCCGGACGAG GCGCGGACGT TCGGTCTCGA AGCGCTGTTT CGAGAGGCCA AGATCTACTC GTCGATCGGA CAGCTCTACA CGCCGGTCGA CGCCGGGCTC TTGCTGTCCT ACACCGAGGC ACAAGACGGC CAGATCCTCG AGATGGGCAT CACCGAAGCC GGTGCCACGG CGATGTTCAC CGCGGCCGGC ACGTCGTATG CAACGCTCGG CGTTCCGATG ATCCCGGTGT ACCTCTTCTA CTCCATGTTC GGCTTCCAGC GGACGATGGA CCTGCTTTGG GCGGCCTCGG ACGCACGAGC GCGCGGCTTT CTCGTCGGCG CCACGGCGGG GCGCACCACG CTCCTCGGTG AGGGCCTCCA GCACACCGAT GGACATTCGC TGCTCCTGGC GGCGGCATTC CCCAACGTGC AGGCCTACGA CCCAGCGTTC GCCTACGAGA TCGCAACCGT CTTCGAGCAC GGGATCGCCG ACATGTACGG TCCCCAGCCG AGAGACGTGA TCTACTACCT GACGACCTAC AACGAGAACT ACCCGATGCC GCCCGCGCCC GACCACCTCG AGCGAGCGGC ACTGGTCGAG GCGATCATGC GCGGCGGGTA TCTCTTCCGT CCTGCCCCCG AGATGGGTGA CGTCGAGCCG ATCTCGGCAG CGACCCCTCG CGATCGGCGC CGTCCCGTGA CGCTGTTCTT CTCCGGAACC GCGCACCGGG CAGTGCTCGA GGCCCAGAGC GAACTCGCTC GCCACTGGGG CGTGGCAGCG ACCGCATTCT CGATCACGTC GTACAAGCGC TTGCGCGAAG ACGCCCTCGA GGCCGAGCGC ACGGAGCGAC TGACCGGGAC CGAACGCCAG CGCGTGTGGC TCGACGAGCT CATGGCCCAG TCGAGCGGGC CCATCGTCGC CACCACGGAC TACGTCCGGC TCGTCGCCGA ACAGGTCGCC AACTTCGTCG ATCGACCTTT CCTCGCGCTC GGCACGGACG GCTTCGGTCG CTCGGATACG CGCGAGGCGC TTCGACGCTT CTTCGAGGTC GACGCGGCGC ACGTCGTCGT CGCCGCGATC GCGCAACTCG TGCGCATCGG CGAGGCGAAG CCCGAGGAAC TCCACGATGC GCTCGCGCAC TACGGAGTCT CACCCGAGCG CTTCGACCCG ACCATGTAG
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Protein sequence | MIIDGFAHQI PDIDPDETAE WVDSFNALVD ERGRQRATFM LMKLLEAARE RQVGFPATVS TPYINTIAPE NEPWFPGDEA IERRIRAFIR WNAAVMVTRA NHAADGIGGH LSTYASSAAL YEVGFNHFFR GKDTEYPGDF VYFQGHASPG FYARAFLEGR LTEAQLNHFR MEVGGQGLSS YPHPRLMPDF WEFPTVSMGL GPIQAIYHAM FNRYMENRKL AQAASSRIWA FVGDGELDEP EAVGALGVAG REHLDNLIFV VNCNLQRLDG PVRGNGKIIQ ELEATFRGAG WNVIKVIWGS KWDELLARDV DGVLLNKMNT TPDGDFQKLA TESGAYIREH FFGPDPRLRR LVEHLSDEEL QALPRGGHDY RKLYAAYHAA VNHTGSPTAI LAKTIKGWTL GPDIEARNAT HQIKKMTREQ LLEFRDRLHL NDVISDEMLA GEDPPYITLP PGSIEEEYLH TRRRVLGGYL PKRVERARSL PAPSSEAFAE FYDGSGAQAV STTMVMARIL RSLIKDPQVG SRIAPIVPDE ARTFGLEALF REAKIYSSIG QLYTPVDAGL LLSYTEAQDG QILEMGITEA GATAMFTAAG TSYATLGVPM IPVYLFYSMF GFQRTMDLLW AASDARARGF LVGATAGRTT LLGEGLQHTD GHSLLLAAAF PNVQAYDPAF AYEIATVFEH GIADMYGPQP RDVIYYLTTY NENYPMPPAP DHLERAALVE AIMRGGYLFR PAPEMGDVEP ISAATPRDRR RPVTLFFSGT AHRAVLEAQS ELARHWGVAA TAFSITSYKR LREDALEAER TERLTGTERQ RVWLDELMAQ SSGPIVATTD YVRLVAEQVA NFVDRPFLAL GTDGFGRSDT REALRRFFEV DAAHVVVAAI AQLVRIGEAK PEELHDALAH YGVSPERFDP TM
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