Gene Afer_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0713 
SymbolaceE 
ID8322773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp717041 
End bp719779 
Gene Length2739 bp 
Protein Length912 aa 
Translation table11 
GC content66% 
IMG OID644951848 
Productpyruvate dehydrogenase subunit E1 
Protein accessionYP_003109336 
Protein GI256371512 
COG category[C] Energy production and conversion 
COG ID[COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component 
TIGRFAM ID[TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.8227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCATCG ACGGCTTCGC ACATCAGATC CCCGACATCG ACCCCGACGA GACGGCGGAG 
TGGGTTGACT CCTTCAACGC ACTCGTCGAC GAGCGAGGTC GCCAGCGAGC CACCTTCATG
CTGATGAAGC TGCTCGAAGC GGCGAGGGAG CGCCAGGTCG GCTTCCCCGC GACGGTCTCG
ACACCCTACA TCAACACCAT CGCACCGGAG AACGAGCCAT GGTTTCCGGG GGACGAGGCC
ATCGAGCGCA GGATCCGTGC GTTCATCCGT TGGAACGCCG CGGTGATGGT GACGAGAGCG
AACCATGCCG CGGACGGCAT CGGCGGGCAC CTGTCGACGT ATGCGAGCTC GGCAGCTCTC
TACGAGGTTG GCTTCAACCA CTTCTTCCGC GGTAAGGACA CCGAGTACCC CGGCGACTTC
GTCTACTTCC AAGGACATGC TTCACCAGGT TTCTACGCCC GCGCCTTCCT CGAGGGACGC
CTCACCGAGG CGCAGCTGAA TCACTTCCGC ATGGAGGTCG GTGGCCAGGG CCTGTCGTCG
TATCCGCATC CGCGACTCAT GCCGGACTTC TGGGAGTTCC CCACGGTCTC GATGGGCCTC
GGGCCCATCC AGGCGATCTA CCACGCGATG TTCAACCGCT ACATGGAGAA TCGCAAGCTC
GCCCAGGCCG CTTCCAGTCG CATCTGGGCG TTCGTGGGCG ATGGCGAGCT CGACGAACCC
GAAGCGGTGG GAGCGCTCGG TGTGGCCGGA CGCGAGCACC TCGACAACCT CATCTTCGTC
GTGAACTGCA ACCTGCAGCG TCTGGACGGC CCAGTTCGGG GCAACGGCAA GATCATCCAA
GAGCTCGAGG CGACCTTCCG CGGCGCCGGC TGGAACGTGA TCAAGGTGAT CTGGGGCTCG
AAGTGGGACG AGCTCCTCGC CCGGGACGTC GACGGGGTGC TGCTGAACAA GATGAACACG
ACGCCAGACG GCGACTTCCA GAAGCTCGCG ACCGAGTCGG GGGCCTACAT TCGCGAACAC
TTCTTTGGAC CCGACCCACG CCTCCGTCGC CTCGTGGAGC ACCTCTCCGA CGAGGAGCTC
CAGGCGCTCC CTCGTGGTGG ACACGACTAC CGAAAGCTCT ACGCGGCCTA CCACGCCGCG
GTGAACCACA CGGGTTCACC CACCGCGATC CTCGCCAAGA CCATCAAGGG TTGGACGCTC
GGCCCGGACA TCGAGGCGCG CAACGCAACC CACCAGATCA AGAAGATGAC CCGGGAGCAG
CTCCTCGAGT TCCGTGATCG CCTCCACCTG AACGACGTGA TCTCGGACGA GATGCTTGCG
GGCGAGGATC CGCCCTACAT CACGCTTCCT CCGGGCTCGA TCGAGGAGGA GTATCTCCAC
ACACGGCGCC GCGTCCTCGG CGGCTACCTC CCGAAGCGCG TCGAACGCGC ACGGAGCCTC
CCTGCGCCGA GCAGCGAGGC GTTTGCCGAG TTCTACGACG GCTCTGGCGC CCAAGCGGTG
TCGACGACGA TGGTGATGGC TCGCATTCTG CGATCGCTCA TCAAGGACCC ACAGGTCGGA
TCCCGTATCG CGCCGATCGT GCCGGACGAG GCGCGGACGT TCGGTCTCGA AGCGCTGTTT
CGAGAGGCCA AGATCTACTC GTCGATCGGA CAGCTCTACA CGCCGGTCGA CGCCGGGCTC
TTGCTGTCCT ACACCGAGGC ACAAGACGGC CAGATCCTCG AGATGGGCAT CACCGAAGCC
GGTGCCACGG CGATGTTCAC CGCGGCCGGC ACGTCGTATG CAACGCTCGG CGTTCCGATG
ATCCCGGTGT ACCTCTTCTA CTCCATGTTC GGCTTCCAGC GGACGATGGA CCTGCTTTGG
GCGGCCTCGG ACGCACGAGC GCGCGGCTTT CTCGTCGGCG CCACGGCGGG GCGCACCACG
CTCCTCGGTG AGGGCCTCCA GCACACCGAT GGACATTCGC TGCTCCTGGC GGCGGCATTC
CCCAACGTGC AGGCCTACGA CCCAGCGTTC GCCTACGAGA TCGCAACCGT CTTCGAGCAC
GGGATCGCCG ACATGTACGG TCCCCAGCCG AGAGACGTGA TCTACTACCT GACGACCTAC
AACGAGAACT ACCCGATGCC GCCCGCGCCC GACCACCTCG AGCGAGCGGC ACTGGTCGAG
GCGATCATGC GCGGCGGGTA TCTCTTCCGT CCTGCCCCCG AGATGGGTGA CGTCGAGCCG
ATCTCGGCAG CGACCCCTCG CGATCGGCGC CGTCCCGTGA CGCTGTTCTT CTCCGGAACC
GCGCACCGGG CAGTGCTCGA GGCCCAGAGC GAACTCGCTC GCCACTGGGG CGTGGCAGCG
ACCGCATTCT CGATCACGTC GTACAAGCGC TTGCGCGAAG ACGCCCTCGA GGCCGAGCGC
ACGGAGCGAC TGACCGGGAC CGAACGCCAG CGCGTGTGGC TCGACGAGCT CATGGCCCAG
TCGAGCGGGC CCATCGTCGC CACCACGGAC TACGTCCGGC TCGTCGCCGA ACAGGTCGCC
AACTTCGTCG ATCGACCTTT CCTCGCGCTC GGCACGGACG GCTTCGGTCG CTCGGATACG
CGCGAGGCGC TTCGACGCTT CTTCGAGGTC GACGCGGCGC ACGTCGTCGT CGCCGCGATC
GCGCAACTCG TGCGCATCGG CGAGGCGAAG CCCGAGGAAC TCCACGATGC GCTCGCGCAC
TACGGAGTCT CACCCGAGCG CTTCGACCCG ACCATGTAG
 
Protein sequence
MIIDGFAHQI PDIDPDETAE WVDSFNALVD ERGRQRATFM LMKLLEAARE RQVGFPATVS 
TPYINTIAPE NEPWFPGDEA IERRIRAFIR WNAAVMVTRA NHAADGIGGH LSTYASSAAL
YEVGFNHFFR GKDTEYPGDF VYFQGHASPG FYARAFLEGR LTEAQLNHFR MEVGGQGLSS
YPHPRLMPDF WEFPTVSMGL GPIQAIYHAM FNRYMENRKL AQAASSRIWA FVGDGELDEP
EAVGALGVAG REHLDNLIFV VNCNLQRLDG PVRGNGKIIQ ELEATFRGAG WNVIKVIWGS
KWDELLARDV DGVLLNKMNT TPDGDFQKLA TESGAYIREH FFGPDPRLRR LVEHLSDEEL
QALPRGGHDY RKLYAAYHAA VNHTGSPTAI LAKTIKGWTL GPDIEARNAT HQIKKMTREQ
LLEFRDRLHL NDVISDEMLA GEDPPYITLP PGSIEEEYLH TRRRVLGGYL PKRVERARSL
PAPSSEAFAE FYDGSGAQAV STTMVMARIL RSLIKDPQVG SRIAPIVPDE ARTFGLEALF
REAKIYSSIG QLYTPVDAGL LLSYTEAQDG QILEMGITEA GATAMFTAAG TSYATLGVPM
IPVYLFYSMF GFQRTMDLLW AASDARARGF LVGATAGRTT LLGEGLQHTD GHSLLLAAAF
PNVQAYDPAF AYEIATVFEH GIADMYGPQP RDVIYYLTTY NENYPMPPAP DHLERAALVE
AIMRGGYLFR PAPEMGDVEP ISAATPRDRR RPVTLFFSGT AHRAVLEAQS ELARHWGVAA
TAFSITSYKR LREDALEAER TERLTGTERQ RVWLDELMAQ SSGPIVATTD YVRLVAEQVA
NFVDRPFLAL GTDGFGRSDT REALRRFFEV DAAHVVVAAI AQLVRIGEAK PEELHDALAH
YGVSPERFDP TM