Gene Afer_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0659 
Symbol 
ID8322719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp668707 
End bp669792 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content74% 
IMG OID644951798 
Productaminotransferase class I and II 
Protein accessionYP_003109286 
Protein GI256371462 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCAGC GCCCCTCCCG CGTCGAGCTC ACCGCGCTCG CAGCCGATCG GCACCCGTTC 
GTCGTCGATG CGTCCATCGG CTCGCCCGTC GATCCGCCCC CAGCGTTCGT CCCGCACCTG
CTCGCGTGCC AGGGGGAGGA GCGTGCGTAC CCGCCAGCGG CAGGGACGCC CGCACTCGTG
GAGTCGGCGA CGCGCTGGTT CCACGCGCTG CGGGGGGTGA CGCTCCCCGA CGGCGCGGTC
GCGCCGACCA TGGGGTCCAA GGAGGCCATC GGTACGCTGG CGTGGTTGCT TCGGGAGCGC
CGACCCGATC GGGGGGTCGT GCTCATCCCC GGGCGCGCCT ACCCCACCTA CGCCGAGGGA
GCGCGGGCGG CCGGCTGTGA GATCGTGCGG GTCCCGGACG ACTGCTCGGG TGCTCCTGCC
TTCGACGCCG TGGCTGCGTC CGTGTGGGAT CGCACGTTGG TCGCGTGGGT CAACTCGCCG
TCGAATCCGA CCGGTGCGGT CTATGACCCG GGGCCGGTCG TCGCCCTCGC CCGCGAGCAC
GGTGCGGTGC TGGCCTCGGA CGAGGCCTAC GGCGACTTCG TGTGGTCGGG GGAGGCCCCG
AGCGCGCTGC GCGCGGGGCT CGAGGGCACG CTCGCGCTCG TGTCGCTCTC GAAGCGCTCC
AACCTGGCCG GGCTGCGGCT CGGTCTCGTG GCGGGCGACC CCATGCTCGT GGACGAGGTG
GTCGCGCGCC GACGCGCGCT CGGCCTCTTG GCCTCAGGGC CCTCCCAAGC AGTGGCGGCC
GAGGCGCTCG CCGACGAGGG TCACGTCGCC GAGCAGCGCT CGCGCTACGC TGGGCGGCTG
CGCCGCTTGG CCCGGGTCAT CGAGGCGGTC GCCGACGTCC CGGTGCGCGT ACCCGATGGC
GGCATCTACC TCTGGGTCCG CGCTCCCGAC GACGACGGGG CGGCGTTCGC CAGGTGGCTC
GCGACGCGCC TCGGGATCGT CGTCGCCGAC GGTGCCGACT ACGGCGATCG TGCGTTCGTG
CGCATTGCGG CGACGGTGAA GGATCGGGCG ATCGATGCCC TGTGGGAGCG GGGAGGAGTG
CGATGA
 
Protein sequence
MSQRPSRVEL TALAADRHPF VVDASIGSPV DPPPAFVPHL LACQGEERAY PPAAGTPALV 
ESATRWFHAL RGVTLPDGAV APTMGSKEAI GTLAWLLRER RPDRGVVLIP GRAYPTYAEG
ARAAGCEIVR VPDDCSGAPA FDAVAASVWD RTLVAWVNSP SNPTGAVYDP GPVVALAREH
GAVLASDEAY GDFVWSGEAP SALRAGLEGT LALVSLSKRS NLAGLRLGLV AGDPMLVDEV
VARRRALGLL ASGPSQAVAA EALADEGHVA EQRSRYAGRL RRLARVIEAV ADVPVRVPDG
GIYLWVRAPD DDGAAFARWL ATRLGIVVAD GADYGDRAFV RIAATVKDRA IDALWERGGV
R