| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0643 |
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| Symbol | |
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| ID | 8322703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 648815 |
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| End bp | 651193 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951782 |
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| Product | Polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_003109270 |
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| Protein GI | 256371446 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTCA TCTCGGTTGA GCGTCAGCTG ACCGGGGTAC CCTCGCCGTT GCGCTTCGAG
ACGGGCAAGC TTGCCCTCCA GGCCAACGGA GCTGTGGTCG CGCGCCTCGG CGGCACCACC
GTGCTCGTGA CCGCCACTGG GGCCAAGCAC GTGCGCGAGG GTATCGACTT CTTTCCGTTG
ACCGTCGACG TCGAAGAGCG CATGTACGCC GCGGGCAAGA TCCCCGGTTC GTTCTTCCGC
CGCGAGGGTC GTGCCACGGA CCAGGCGATC CTGACGGCAC GCCTCATCGA CCGTCCACTG
CGACCATCGT TCGCCGATGG CTTTCGCAAC GAGGTGCACG TGGTGGCGAC CGTGCTCGGT
GCCGACCTCG TCAATCCACA CGACGTGCTC GCCATCAACG CGGCCTCGGC CGCGCTCATG
GTGTCGGGGC TGCCCTTCGA GGGGCCGATC GGCGCGGTGC GCGTCGCGCT CGCAGCCGAT
GGGAGCTGGA TTCCGTTCCC GACGTTCCAG CAGGGCGATG CCTCGAGCTT CGAGCTCGTC
GTCGCCGGGC GCAAGACCTC GGACGGTACC GACATCGCGA TCATGATGGT CGAGGCGGGT
GGCACCGAGG CGACCTGGGG CGCATTCGAG GCGAACGCCG CCATCCCGAC CGAAGCGACG
GTCGCGGAGG GGCTCGTCGC TGCGAAGCAG TGGATCCGCG AGAGCATCGA GCTGCAAGAG
GAGCTGGTCG CCAAGCTCGA TCATCGGCCG ACCTTTGCGT GGACGCCGAT GCGCGACTAC
GAAGAGGACG TGCTCGTCCG CGTGAACGAG GTCGGTCGCG AGCGACTGGC CGCGGCCAAC
GCGCACACCG ACAAGGTGAC GCGCCAAGAT GCCCTCGACG CCGCTGGCGA TGCCATCTGG
GCTGAACTCG CCGACGAGTT CCCCGAGCGC GAGCGAGAGG TGCGGGCTGC GATCCGTCGG
GTCACCAAGG AGATCGTGCG CGAGCGCATC ACGCGCGAGG GCGTGCGGAT CGACGGACGC
GACACGACGA CCATCCGTCC GCTCCTCATC GAAGTGGGAC TCATCCCGAC GGCGCATGGT
TCGGGCCTCT TCCAGCGGGG CGAGACCCAA GTGCTCAACA TCTGCACGCT CGGCATGCCG
CGCATGAACC AGCAACTCGA CACCCTCGGG GTCGACGAGG AAAAGCGCTA CATGCACCAC
TACAACATGC CGCCGTTTGC GACCGGCGAG ACGGGCTTCA TGCGAGGACC CAAGCGTCGC
GAGATCGGTC ATGGCCTGCT CGCCGAGCGC GCGCTCGTGC CGGTGCTGCC GCCGGAGTCC
GAGTTCCCGT ATGCCCTTCG CCTCGTGTCG GAGGTGCTGA GTTCCAACGG TTCGACCTCC
ATGGCGTCCG TGTGCGGCTC GACGTTGTCG CTGATGGACG CGGGCGTGCC GATCCGGGCG
GCCGTGGGGG GCATCGCGAT GGGCCTCATC GCCCACGACG GTGTCTACAC GACCCTGACG
GACATTCTGG GTGCCGAGGA TGCCTTCGGT GACATGGACT TCAAGGTGGC AGGTACCCGG
GAGTTCGTGA CCGCACTGCA GCTCGACACC AAGATCGACG GGATCCCCTC GGAGGTGCTC
GCGGCCGCCC TCGAGCAGGC GCGCCAGGCC CGCGTGTCGA TCCTCGATCA GATGCTCGCC
GTCATCCCGG CGCCGCGTTC GGAGGTGGCC GAGACCGCTC CGCGGCTCAT CACCTTCCAG
GTGCCGCTCG ACAAGGTCGG TGAGATCATC GGCCCGAAGG GCAAGACCAT CAACACGCTG
CAGCAAGAGA CGGGTGCCGA CGTCTCGATC GACGACGACG GCGTGGTCGG AACCGTGGTC
ATCGGTGCGC GTGACATCGA GGCAGCGCGC GAGGCGGAGC GGCGGATCCA GCTGATCCTC
AACCCGCCGC AGGCCACCCT CGGCGAGGTC TACGAGGGCA AGGTCGTCGG CATGACCAAG
TTCGGCGCCT TCGTCAACGT CCTCCCCGGC AAGGATGGCC TCGTGCACAT CTCGAAGCTC
GGACGCGGCA AGCGCGTCGA GCGCGTCGAA GACGTCCTCG AGATGGGCCA GGTGCTCAAG
GTGCGCGTCG ACGACATCGA TCCGTCGGGC AAGCTCTCGC TCTCGATCGT CGACGACGAG
AACGGTGAGA CTCCAGCCCA CGCTGGCGCG TCCCATGCCG GCTCGTCGCA CGCCGGCGCG
TCGCGGACCT CGGGGCGTGA GGGCTCCGAT CGTCGCCATC GGCGTGACGA GCGCCCCGGC
AACGACCGTC GTGGATCGTC GTCGGCTCCG GCCAACGCCG TGTCGTTCGA GGACCGCTTC
GAGTCGGAGA TCCAGCGCGA ACTCGGCGAC CTCCAGTAG
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| Protein sequence | MSFISVERQL TGVPSPLRFE TGKLALQANG AVVARLGGTT VLVTATGAKH VREGIDFFPL
TVDVEERMYA AGKIPGSFFR REGRATDQAI LTARLIDRPL RPSFADGFRN EVHVVATVLG
ADLVNPHDVL AINAASAALM VSGLPFEGPI GAVRVALAAD GSWIPFPTFQ QGDASSFELV
VAGRKTSDGT DIAIMMVEAG GTEATWGAFE ANAAIPTEAT VAEGLVAAKQ WIRESIELQE
ELVAKLDHRP TFAWTPMRDY EEDVLVRVNE VGRERLAAAN AHTDKVTRQD ALDAAGDAIW
AELADEFPER EREVRAAIRR VTKEIVRERI TREGVRIDGR DTTTIRPLLI EVGLIPTAHG
SGLFQRGETQ VLNICTLGMP RMNQQLDTLG VDEEKRYMHH YNMPPFATGE TGFMRGPKRR
EIGHGLLAER ALVPVLPPES EFPYALRLVS EVLSSNGSTS MASVCGSTLS LMDAGVPIRA
AVGGIAMGLI AHDGVYTTLT DILGAEDAFG DMDFKVAGTR EFVTALQLDT KIDGIPSEVL
AAALEQARQA RVSILDQMLA VIPAPRSEVA ETAPRLITFQ VPLDKVGEII GPKGKTINTL
QQETGADVSI DDDGVVGTVV IGARDIEAAR EAERRIQLIL NPPQATLGEV YEGKVVGMTK
FGAFVNVLPG KDGLVHISKL GRGKRVERVE DVLEMGQVLK VRVDDIDPSG KLSLSIVDDE
NGETPAHAGA SHAGSSHAGA SRTSGREGSD RRHRRDERPG NDRRGSSSAP ANAVSFEDRF
ESEIQRELGD LQ
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