| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0641 |
|---|
| Symbol | |
|---|
| ID | 8322701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 647475 |
|---|
| End bp | 648419 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644951780 |
|---|
| Product | riboflavin biosynthesis protein RibF |
|---|
| Protein accession | YP_003109268 |
|---|
| Protein GI | 256371444 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.967274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTGG TTCGAGAGCT CGATGACCCT GCCTTCGTCG TCCCCAGTTC CGTCGTGACC
ATCGGGACCT TCGATGGTCT GCACCTCGGA CACCAGCGAC TCATCCGCGT CGCACGCGAC
GTCGCGCGTC GAGCACGCCT GCCCTTGGTC GTGGTGAGTT TCGATCGCCA CCCCCTGCGC
TTGCTCGCAC CCGAGCGAGT GCCGCCGCTC ATCATGACGC CACTGCAGCG CGATCGTGTG
CTCGCGTCTC AGGGCGTCGG CGTGCTGTAT CTGCTGCACT TCGGACCCGA ACGCGCTCAG
CAGGCGCCCG CGTCCTTCGC CGCCGAGGTG CTCGCGTCCA GGCTCGGTGC GACCCACGTC
GTCGTCGGCG CCAACTTCAC CTTCGGTGCC CGAGGGGCGG GTCGCCCTGC CGACCTCGTC
GCCATGGGTC GCGACCTCGG CTTCTCGGTC GACGTCGAGG AGTTGGTCGA CGACGACGGC
GAGGTGGTGT CCTCGAGTCG GATCCGTGCG ACGGTCGCCT CGGGGGACCT CGTCGAGGCC
TCGCGCCTGC TGGGCCGTGC TTACGCGGTC GAAGGTGTCG TCGTCGCGGG GGATGGCCGC
GGTCGAGAAC TCGGCTTCCC GACGGCCAAC GTCGTCGTCT CTTCGTCCTA TGCGAGTCCG
CCCGATGGCG TCTATGCCGG ATGGGCGTGG AACGACTCGG GTCGCTGGGC TGCTGCGATC
TCGCTCGGGA CGAGGCCGAC GTTCTACCCG ACCGACGGCC TCCGGCTCCT CGAGGTCCAC
CTGCTGGACG CCGACGTCGA CCTCTATGGT CAGTCGTTGG AGGTGGCGTT CGACTCCCGG
CTCCGAGGGC AAGTCGCCTT CGCGGGTGTG GAGGAGCTGA TCGCGCAGAT GCACGCCGAC
GTCGCCGAGG TCCGTGTGCG CGTGGGAGAC CTCGAGGGCA GGTAG
|
|---|
| Protein sequence | MIVVRELDDP AFVVPSSVVT IGTFDGLHLG HQRLIRVARD VARRARLPLV VVSFDRHPLR
LLAPERVPPL IMTPLQRDRV LASQGVGVLY LLHFGPERAQ QAPASFAAEV LASRLGATHV
VVGANFTFGA RGAGRPADLV AMGRDLGFSV DVEELVDDDG EVVSSSRIRA TVASGDLVEA
SRLLGRAYAV EGVVVAGDGR GRELGFPTAN VVVSSSYASP PDGVYAGWAW NDSGRWAAAI
SLGTRPTFYP TDGLRLLEVH LLDADVDLYG QSLEVAFDSR LRGQVAFAGV EELIAQMHAD
VAEVRVRVGD LEGR
|
|---|
| |