Gene Afer_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0600 
Symbol 
ID8322659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp606241 
End bp606939 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID644951738 
Productmembrane-flanked domain protein 
Protein accessionYP_003109227 
Protein GI256371403 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAGGG GTCATCCGAC GACCGGTCTG CGGGATCAAC GCCCGAGCGT GCAGCGGCGC 
GTCGCGGCGT TGCTCGTGTC GAACGAGCGC CTCGAGCACG TCTTCCATCC CCACTGGTGG 
CGACTCATCG AGGCGAGCGG CGGTGGGCTC GTCGGGCTCG TCGTCGCGGC GCTCGTGGCT 
GGCGTCGGAT TCGGACCATC GTTGCTCATC GCGGCCCCGG TCGCGGTGGG CTCGGTCCTG 
TGGATCGTGA TCGGGGTAGT GCGCTGGCGG TCCGAACTCC TGTTGCTCAC GGATCGCCGG 
GTCGTGTTCA CCCGAGGAGT CTTCGCCCGC CGCACGAGCG AGATCCCACT GAAGCACGTG 
AACGACGTCT CCACCGAGCA GGGGCTCATC GGGAGGTTGC TCGACTTCGG CAGGGTTCGT 
ATCGTCTCGG GCAACGCCAA CGGACAAGAG GTCGTGACCT ACCTCCACGG GCCGGCGCGC 
CTTCGCCAGG AGATTTCGCG ACTGACTCAA GCGAGCGAGT CGACGCCGAC TCCAACGGCG 
ACATCGACCG GGGGGAGCCT CGTCGAGCAG ATCCAGATGC TCGCGTTCTT GCATCGCATG 
GGCGAGATCA GCGACGACGA GTTCCAGCGC GCCAAGGAGC AGGTGCTCTG GGGCGACGGC 
GCGCGAGAGT CCGAAGGGGA CGTCGAAGGA GGACCGTGA
 
Protein sequence
MARGHPTTGL RDQRPSVQRR VAALLVSNER LEHVFHPHWW RLIEASGGGL VGLVVAALVA 
GVGFGPSLLI AAPVAVGSVL WIVIGVVRWR SELLLLTDRR VVFTRGVFAR RTSEIPLKHV 
NDVSTEQGLI GRLLDFGRVR IVSGNANGQE VVTYLHGPAR LRQEISRLTQ ASESTPTPTA 
TSTGGSLVEQ IQMLAFLHRM GEISDDEFQR AKEQVLWGDG ARESEGDVEG GP