| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0493 |
|---|
| Symbol | |
|---|
| ID | 8322552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 493006 |
|---|
| End bp | 495564 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644951644 |
|---|
| Product | Peptidase M1 membrane alanine aminopeptidase |
|---|
| Protein accession | YP_003109133 |
|---|
| Protein GI | 256371309 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCACCCG TGACAGAGCA CAACCCGTAC CGGCTTTCGC GGGTCTGGAC CCCTCGACAC
TACGACCTCA CGCTCCAGGT CGACCCGGAC GTCGACCCCT ACACGGGTCA CGTGCGCATC
GACGGTGACG TCCACGAGCC CACCGCGGTG CTCGAGGTGC ACGCGGTCGA TCTGGCGATC
TCGTCGGCGA TCGCCACGTT CGCCGGGACG CGCGTCACCC TCACACCCCG CCCGCGCAGC
GAGCACGGCG TGGTCGAGCT CCACGCGGAT GCGCCCATGC CAGCCGGCCC CTTCGCGCTC
GATCTCGACT TCTCGGGTGC GCTGCGTCGG GACCTCGACG GACTGTACCT GTCGACCTAT
CGCGACGCAG ACGGCACGAC GCATCGCATC GCGACGACGC AGTTCGAATC CACCGGTGCG
CGCAAGGCCT TCCCTTGCTT CGACGAGCCC GACGCCAAGG CCACCTTCGC CGTCACGCTC
GAGATCCCGA GCCACCTCGA GGCCTACTCG AACTATCCCG TCACCGAGCG CACGACGATC
GCACCCGGCA CCGACCGGTG GCGTTTTGCG CCCACGATGA CGATGTCCAC CTACCTGCTC
GCCATGGTCA TCGGCCGCTT CGTCGCGACC GAGCCGGTCT TCCACCGCGA CGTCCCCATC
CGGGTCGTGC ACGTGCCCGG TAAGGAGCAG CTCACGGCCT TTGCTCTCGA GGTCGCCCAG
CACGCCCTCG CCTTCTTCGA GGACTACTTC GCGATCGCCT ACCCCGCCCC CAAGGTCGAC
CTGCTCGCGA TCCCCGACTT CGCGGCCGGC GCGATGGAGA ACCTGGGCGC GATCACCTTC
CGCGAGACCG CCCTCCTCGT CGACCGCGAC AACGCCGCGC AGGTGGATCT CGAGCGCGTC
GCCGACGTCG TCTGCCACGA GCTCGCCCAC ATGTGGTTCG GCGATCTCGT CACGATGCGC
TGGTGGAACG GCATCTGGCT GAACGAGGCC TTCGCCACCT TCATGGAGGT CACCGCCGTC
GACGCCTTCC GCCCCGAGTG GCGCCGGTGG GAGGCCTTTG CCATCGGTCG GCTCGCGGCC
ATGGGCATCG ACGCCCTTCC CTCGACCCGC CCCATCGAGT ACACGGTGCG CGCACCCGAG
GACGCCGAGG ACATGTTCGA CCTTCTCACC TACGAGAAGG GGGCGTCCAT CTTGCGCATG
GCCTCCGAGC ACCTCGGACC CGAGGTCTTC CGCGACGGCG TGCGTCGCTA CCTGCGGGCC
CACGCCTACG GCAACGCCGA GACCCAGGAT CTCTGGGCTG CCCTTGGCGA GGCGAGCGGT
ACCGACGTCG GCGCCATGAT GGACACCTGG GTGTTCCAGG GCGGCCATCC GCTCGTCAGC
GTCGATCCGC TCCCCGATGG CGTCCGGCTC GCCCAGACGC CGTTCCGGCT CCTCGCGGCC
GACGACGATC CGATCGGCGC CATCGGATCA CTGTGGCACG TGCCGATCGC ACTGCGCTCG
CTCGTCGATG GCGAGCGGCG GGTGCTGCTC GACCAGCCCG AGATGTCGGC CGAGGTCGGT
CCCGCGCCGG TCGTGGTCAA CGCCCACGGC GAGGGCGTCT TTCGGGCCCG CTACGCCCAA
CAGCTCCTCG CCCAGCTGGC CGAGTCGTTC GGCCAGCTCG AGACGCTCGA GCGCTTCAAC
CTCATCGCCG ATGCATGGGC GCTCACCCAG TCGGGCGCCG CGCCACTCGA GGACTTCCTC
GGTCTCGCCG AGCGCCTCCG CGACGAGCGC GACCCGAACA TCCTCGGGAT CGGCCAAGCC
GCACTCGGCC TGCTGGAGCG CATCGCCGAA CCGAGCGAGA TCACCCACGT CCGTGCCCTC
GCGGCCTCGG TGTTCGGACC GGTCCTCGAC TACTTCGGCA CCGAGGCCCG CCCGACGGAC
ACCCCGCAGG ATCGCACCGC GCGTGCCATC GCCTACGACG TGCTCGGCGA CATCGCCGAG
GATCCCGACG TGCGCCAGCA CGCCAGAGAA CGCTTCCGTG AGGAGATGAG CGGCATCGGC
GGGCCGAGCG CCGATCTCGT CGCGGCCGTC CTCGGCGTCG TCGCGCGCTT CGGTGATGAG
TCGGACTTTG CCTTCATGCT CGATCGCTAT CGGCACCCGC GCAACCCCCA GGACGAGCAG
CGTCACCTGT TCGCCCTCGC GGAGTTCCGC CAACCAGCGC TCGGGCGGCG CGTGCTGGAT
CTGGCCATGA GCGAAGTGCG AACCCAGGAC GCACCCTTCC TCATCAACCG AGTGATCGCG
AACCCAGCGC TCCAGAACCA GGCGATCGAC TTCTTGTTCG CTCGCTTCGA TGAGATGCTC
GCCCGATTCC CGCTCAACAC GATCGATCGC ATGCTCCAGA GCATCGCGCT CGTCATCGGA
CCGACCACCT ACCAGCGCGC CGGCGAGATC GTACGCTTCC TCGAGGAGCA CCCGATCCCG
GCGGGCAAGC GCGTGCTCGC CCAGACCCTG GAGCGCTACC AGGTCAACCT GCGCCTGCGC
GCCCGCTACG CAGGACGGCT CACCAGCCAA CTCGCCTGA
|
|---|
| Protein sequence | MAPVTEHNPY RLSRVWTPRH YDLTLQVDPD VDPYTGHVRI DGDVHEPTAV LEVHAVDLAI
SSAIATFAGT RVTLTPRPRS EHGVVELHAD APMPAGPFAL DLDFSGALRR DLDGLYLSTY
RDADGTTHRI ATTQFESTGA RKAFPCFDEP DAKATFAVTL EIPSHLEAYS NYPVTERTTI
APGTDRWRFA PTMTMSTYLL AMVIGRFVAT EPVFHRDVPI RVVHVPGKEQ LTAFALEVAQ
HALAFFEDYF AIAYPAPKVD LLAIPDFAAG AMENLGAITF RETALLVDRD NAAQVDLERV
ADVVCHELAH MWFGDLVTMR WWNGIWLNEA FATFMEVTAV DAFRPEWRRW EAFAIGRLAA
MGIDALPSTR PIEYTVRAPE DAEDMFDLLT YEKGASILRM ASEHLGPEVF RDGVRRYLRA
HAYGNAETQD LWAALGEASG TDVGAMMDTW VFQGGHPLVS VDPLPDGVRL AQTPFRLLAA
DDDPIGAIGS LWHVPIALRS LVDGERRVLL DQPEMSAEVG PAPVVVNAHG EGVFRARYAQ
QLLAQLAESF GQLETLERFN LIADAWALTQ SGAAPLEDFL GLAERLRDER DPNILGIGQA
ALGLLERIAE PSEITHVRAL AASVFGPVLD YFGTEARPTD TPQDRTARAI AYDVLGDIAE
DPDVRQHARE RFREEMSGIG GPSADLVAAV LGVVARFGDE SDFAFMLDRY RHPRNPQDEQ
RHLFALAEFR QPALGRRVLD LAMSEVRTQD APFLINRVIA NPALQNQAID FLFARFDEML
ARFPLNTIDR MLQSIALVIG PTTYQRAGEI VRFLEEHPIP AGKRVLAQTL ERYQVNLRLR
ARYAGRLTSQ LA
|
|---|
| |