Gene Afer_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0475 
Symbol 
ID8322534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp477021 
End bp478262 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID644951626 
ProductMgtE intracellular region 
Protein accessionYP_003109115 
Protein GI256371291 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.45499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGATG TCCTGTGGCT CTCCGCCATC CGTCGGGCGC CGGTGCTTGG GCGGGGTGGT 
CACGAGTTTG GTCGTGTCGA TGACGTGGTG CTTCGCCTCG TCGAAGCCAG CTATCCGGTC
GTCGTCGGCG TCCTCGTGCA CGTCGACGAC CAGCCCATGT TCGTGCCGGC AGATCGCATC
GAGGAGTTCG GCACCGAGCG GATCGTCACG ACGCTCGAAG AGGGCGAGCT CGGCCGGTTC
GAGCGTCGGC CCCAGGAGGT GCTCGCGGTT CGTGACCTGC TCGAGCACCA CCTGATCTGG
TCGAAGTCGA AGCTGCGTCC GCGACTCGTG AGCGCTCGGG ACCTCGGCAT GATCCCGTTC
GCGGGCGAGT GGCGCGTCAT CGCGGTCGAC GTCGCCCAAG AGCACCATCG ACGCTTCTGG
CACGCCAAGC GCGAGGCGAG GGTCGTCGAC TGGCGCGATC TCGTCCCCTT GGTGGGCCAT
GTGCCGAGTG CGAGGATCCG CCTCGAGCTG CGCTCGATCC GGCGCCTGCA CCCGGCCGAA
CTCGCCGACC TCCTCGAGGA CGCCTCGGAG TCGGAGGGGC GCGAGATCAT GGCGGCGCTG
CAGGCGGACC CGGCCTTCGA AGCGGACGTC ATGGAAGAGC TCACGCCGCA GGGTCGTCGG
GACGCGATCC GCGAGCGCAG CGACGCCGAG GTCGGCGAGC TGCTCGGCAC CATGGAGCCC
GACGACGCGG TCGACTTGTT GATGAGCCTG GAGCAGGAGC GACGCGAGAG CGTGCTCGCG
CTGGTGCCCG AGCCGCAGCA GGCGACCATC AAGCGCCTGC TCGCCTACAA CCCTGAGTCG
GCCGGTGGGC TCATGACGAC CGACGTCGTC GCGCTCGCGG CAGGGACGAC CGTCGCGGAG
GCCTGCGGCA CGCTTCGCGC GCGCGCCGCC GTACCGGAGA ACCTGTGGGT GCTGTTCGTC
GTCGACGCCG AGGGTCGCTT CCTCGGTCAG CTGCCCCTCG TCGCGCTCCT TCGTGCCGCC
GACGACGCCT CGGTGGATCA GCTCGCTGAC ACCGAGGCGC GCACCGTGCG TCCCGACGCG
GACCTGACGG AGGTCGCCGT CCTCATGGCC GACTTCAACC TCGCCGCCGT GGCCGTCGTC
GACGCCGAGG GGGTGCTCCT TGGCGCGGTC ACCGTCGACG ACGTCCTCGT TCGCACCATC
CAACCGGGAT GGCGCCGACG TGCCGAAGCG CTCGACGGGT AG
 
Protein sequence
MDDVLWLSAI RRAPVLGRGG HEFGRVDDVV LRLVEASYPV VVGVLVHVDD QPMFVPADRI 
EEFGTERIVT TLEEGELGRF ERRPQEVLAV RDLLEHHLIW SKSKLRPRLV SARDLGMIPF
AGEWRVIAVD VAQEHHRRFW HAKREARVVD WRDLVPLVGH VPSARIRLEL RSIRRLHPAE
LADLLEDASE SEGREIMAAL QADPAFEADV MEELTPQGRR DAIRERSDAE VGELLGTMEP
DDAVDLLMSL EQERRESVLA LVPEPQQATI KRLLAYNPES AGGLMTTDVV ALAAGTTVAE
ACGTLRARAA VPENLWVLFV VDAEGRFLGQ LPLVALLRAA DDASVDQLAD TEARTVRPDA
DLTEVAVLMA DFNLAAVAVV DAEGVLLGAV TVDDVLVRTI QPGWRRRAEA LDG