Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0444 |
Symbol | |
ID | 8322503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 441656 |
End bp | 443290 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644951596 |
Product | chaperonin GroEL |
Protein accession | YP_003109085 |
Protein GI | 256371261 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAGA TCTTGGAGTT CGACGAGTCC GCTCGTCGTG CGCTCGAGGC GGGCGTCAAC AAGCTCGCCG ACACCGTCAA GGTGACGCTC GGCCCGAAGG GCCGCAACGT CGTGCTCGCC AAGAGCTTCG GCGCGCCCAC GATCACCAAC GACGGCGTCT CCATCGCTCG CGAGATCGAG CTCGAGGACC CCTTCGAGAA CATGGGTGCC CAGCTCGTCA AGGAGGTCGC CACCAAGACC AACGACGTGG CTGGTGACGG CACCACGACC GCGACCGTCC TCGCGCAGGC GATGATCCGC GAGGGGCTTC GCAACGTCGC GGCTGGTGCG AACCCGATGG CCCTCAAGCG CGGCATCGAG CAGGCGGTCG CGGCCGCCGT CGAGTCCATC GCCGAGCAGG CCAAGCCGGT CGAGGGCCGC AGTGACTTCG CCCAGGTCGC TGCCATCTCG GCAGCCGATC AGGCGGTCGG CGAGGTCCTC GCCGAGGCCA TCGACAAGGT CGGCAAGGAC GGCACGGTCA CCGTCGAGGA GTCGAACACC TTCGGGCTCG AGCTCGAGTT CACCGAGGGC ATGCAGTTCG ACAAGGGCTA CCTGTCGCCG TACTTCGTGA CCAACCAGGA TCGCCAAGAG GCGGTGCTCG AGAACCCGTA CATCCTCTTC TACGCGACGA AGATCTCCTC GATCCACGAG CTGCTGCCCG TGCTCGAGAA GGTCATGCAG GCCGGTCGGT CGTTGCTCAT CGTCGCAGAG GACGTCGAGG GTGAGGCGCT CGCGACGTTG GTCGTGAACA AGATCCGCGG CACCTTCACC TCGGTGGCGG TCAAGGCCCC CGGCTTCGGC GAGCGCCGCA AGGCGATGCT GCAGGACATG GCGATCCTCA CGGGTGGCCA GGTCATCTCG GAAGAGGTCG GCCTCAAGCT CGAGAACGTC ACGCTGGATC TGCTGGGCCA GGCTCGGCGC ATCGAGGTGA CGAAGGACGA GACGAAGATC ATCGGCGGCG CCGGTCAGAA GGCGGACGTC GATGGTCGGA TCGCCCAGAT CCGTCGTGAG ATCGAGGAGA CCGACTCCGA CTGGGACCGT GAGAAGCTCC AGGAGCGCCT CGCCAAGCTC GCCGGTGGTG TCGCGGTCGT CAAGGTCGGC GCCGCGACCG AGGTCGAGCT CAAGGAGAAG AAGCACCGCA TCGAGGATGC GCTCTCCGCG ACTCGTGCAG CCATCGAGGA GGGGATCGTT GCCGGCGGTG GCACGGCGCT CATTCGCGCT CGGGCGCGCG TGAACGACGT GGTCGCCAAG CTCGAGGGTG ACGAGGCGAC GGGCGCGACC ATCGTGGCTC GTTCGCTCGA GGAGCCGCTC AAGTGGATCG CCTACAACGC GGGCATGGAA GGCCCGGTGG TGGTCCAGAC GGTCGAGCAC GAGTCGGGCA ACGTTGGCCT GAACGCTCGT ACCGGTGTGT ACGAGGACCT CGTGAAGGCC GGCGTGATCG ACCCGGCGAA GGTGACGCGC TCTGCGCTGC AGAACGCAGC GTCCATCGCG GCCCTGCTGC TCACGACCGA GGCACTCGTG GCCGACAAGC CCGAGGAGCC GGGTCAGGCG GCGGCCGGCG CTGGCGCAGC CGGCGGCATG GGCGGCATGA TGTAA
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Protein sequence | MPKILEFDES ARRALEAGVN KLADTVKVTL GPKGRNVVLA KSFGAPTITN DGVSIAREIE LEDPFENMGA QLVKEVATKT NDVAGDGTTT ATVLAQAMIR EGLRNVAAGA NPMALKRGIE QAVAAAVESI AEQAKPVEGR SDFAQVAAIS AADQAVGEVL AEAIDKVGKD GTVTVEESNT FGLELEFTEG MQFDKGYLSP YFVTNQDRQE AVLENPYILF YATKISSIHE LLPVLEKVMQ AGRSLLIVAE DVEGEALATL VVNKIRGTFT SVAVKAPGFG ERRKAMLQDM AILTGGQVIS EEVGLKLENV TLDLLGQARR IEVTKDETKI IGGAGQKADV DGRIAQIRRE IEETDSDWDR EKLQERLAKL AGGVAVVKVG AATEVELKEK KHRIEDALSA TRAAIEEGIV AGGGTALIRA RARVNDVVAK LEGDEATGAT IVARSLEEPL KWIAYNAGME GPVVVQTVEH ESGNVGLNAR TGVYEDLVKA GVIDPAKVTR SALQNAASIA ALLLTTEALV ADKPEEPGQA AAGAGAAGGM GGMM
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