Gene Afer_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0400 
Symbol 
ID8322459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp413506 
End bp413802 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content68% 
IMG OID644951552 
ProductRibosomal protein L25/L23 
Protein accessionYP_003109041 
Protein GI256371217 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGTC GGGATCCCTA CGCAACCGTC GTGGCCCCCA TCATTTCGGA GAAGAGCTAC 
GGGCTCCGCG AGGAGGGCGT CTACGTCTTC GAGGTGGCGC CTCGAGCGAC CAAGGTGGAC
GTGCGCGCCG CGGTCGAGCG GCTCTTCGGG GTGCACGTGG TCAAGGTCAA CACGCTCAAC
CGCAAGGGCA AGGCCCGTCG GAGCCGCCGA ACCGGTCGAG TCAGCGTGGA GCCCACCCGC
AAGCTGGCCT ACGTCACCTT GCGCGAGGGC GAGCGCATCG AGCTGTTGGA GAGCTGA
 
Protein sequence
MSGRDPYATV VAPIISEKSY GLREEGVYVF EVAPRATKVD VRAAVERLFG VHVVKVNTLN 
RKGKARRSRR TGRVSVEPTR KLAYVTLREG ERIELLES