Gene Afer_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0399 
Symbol 
ID8322458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp412865 
End bp413509 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content69% 
IMG OID644951551 
Productribosomal protein L4/L1e 
Protein accessionYP_003109040 
Protein GI256371216 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCG CCAAGGTCAT CGACGCCACG GGTCGTACGC TGCGCGAAGA GGAACTGCCG 
GGCGAGGTCT TCGCGCACGC TCCCAACATC GCGCTGTTGC ATCAGGTTGT CGTTGCGGAG 
CAGGCCGGTG CGCGCCGGGG AACGCATTCG ACGAAGACGC GGGCAGAGGT CGCCGGAGGC 
GGCGCGAAGC CCTATCGCCA GAAGGGGACC GGCAACGCTC GCCAGGGTTC GATCCGGGCC 
CCTCAGTACA AGGGTGGCGG TATCGTTCAC GGCCCCAAGC CGCGCGACTA CTCCCAGCGC 
ACCCCCCGCA AGATGCTGCG CGCGGCGCTG GCACAGGCGT TGTCCGATCG GGCCAGCGCC 
GGCGTGATCT ACGTGCTCGA GGACGACGTC ATCACGGCGC CGTCGACCAA GGCGGCGCTT 
GCCTGTCTGC GCGGGGCTGG TCTCGAGGAT CGCAAGGTGC TCGCGCTGGT GGCCGGTGCA 
ACCGACGAGG CCGTCTTCAA GAGCGTGCGC AACCTCCCCA CGGTTCGTGT CCATCGGGCG 
GGCTTGGTGC TGGTAAGTGC GGTTCTCGCT TCCGACGCCG TGCTGTTCAC GCGCGCAGCG 
CTGGCAGAGC TCCTCGGGCG CGTGGGAGTG GAGGTTGCCA AGTGA
 
Protein sequence
MASAKVIDAT GRTLREEELP GEVFAHAPNI ALLHQVVVAE QAGARRGTHS TKTRAEVAGG 
GAKPYRQKGT GNARQGSIRA PQYKGGGIVH GPKPRDYSQR TPRKMLRAAL AQALSDRASA 
GVIYVLEDDV ITAPSTKAAL ACLRGAGLED RKVLALVAGA TDEAVFKSVR NLPTVRVHRA 
GLVLVSAVLA SDAVLFTRAA LAELLGRVGV EVAK