Gene Afer_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0379 
Symbol 
ID8322434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp391512 
End bp392006 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content64% 
IMG OID644951527 
Productprotein of unknown function DUF520 
Protein accessionYP_003109020 
Protein GI256371196 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0120708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCCT TTGACGTCGT CTCGGAGATC GACCTGCAAG AGGTGCGCAA TGCGGTCGAT 
CAGGCGTCGC GCGAGGTGAC GACTCGCTTC GACTTCAAGA ACACCGGCTC GTCGATCAAC
CTCAACGATC GAGAGCTCAC CATCACGCTG AACTCGGAGA CCCCCGACCG GCTGCGGGCA
CTCGCGACCG TCCTCGAGGA GCGGCTCGTC AAGCGCGGTG TCTCGCTCAA GGCGCTCGAT
CGAGGCCCGA TCGAAGAGGC CGCGCGAGGT ACGCAGCGCC AGGTGATCCG CCTCGTCGCA
GGCCTGAATC AAGATCGAGC ACGAGCCGTC ACGGCCGCGA TCAAGGCCGC TGGGATCAAG
GGCGTCCAGG CGCAGATACA GGGCGAGCAA GTCCGAGTCA CCTCGAAGAA GCGTGACGAC
CTCCAGAGCG TGATCGCCCA CCTCCGCGAG CACATCACGG ACTTCCCGGT ACAGTTCACG
AACTTCCGAG ACTGA
 
Protein sequence
MPSFDVVSEI DLQEVRNAVD QASREVTTRF DFKNTGSSIN LNDRELTITL NSETPDRLRA 
LATVLEERLV KRGVSLKALD RGPIEEAARG TQRQVIRLVA GLNQDRARAV TAAIKAAGIK
GVQAQIQGEQ VRVTSKKRDD LQSVIAHLRE HITDFPVQFT NFRD