Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0379 |
Symbol | |
ID | 8322434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 391512 |
End bp | 392006 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644951527 |
Product | protein of unknown function DUF520 |
Protein accession | YP_003109020 |
Protein GI | 256371196 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0120708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCCT TTGACGTCGT CTCGGAGATC GACCTGCAAG AGGTGCGCAA TGCGGTCGAT CAGGCGTCGC GCGAGGTGAC GACTCGCTTC GACTTCAAGA ACACCGGCTC GTCGATCAAC CTCAACGATC GAGAGCTCAC CATCACGCTG AACTCGGAGA CCCCCGACCG GCTGCGGGCA CTCGCGACCG TCCTCGAGGA GCGGCTCGTC AAGCGCGGTG TCTCGCTCAA GGCGCTCGAT CGAGGCCCGA TCGAAGAGGC CGCGCGAGGT ACGCAGCGCC AGGTGATCCG CCTCGTCGCA GGCCTGAATC AAGATCGAGC ACGAGCCGTC ACGGCCGCGA TCAAGGCCGC TGGGATCAAG GGCGTCCAGG CGCAGATACA GGGCGAGCAA GTCCGAGTCA CCTCGAAGAA GCGTGACGAC CTCCAGAGCG TGATCGCCCA CCTCCGCGAG CACATCACGG ACTTCCCGGT ACAGTTCACG AACTTCCGAG ACTGA
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Protein sequence | MPSFDVVSEI DLQEVRNAVD QASREVTTRF DFKNTGSSIN LNDRELTITL NSETPDRLRA LATVLEERLV KRGVSLKALD RGPIEEAARG TQRQVIRLVA GLNQDRARAV TAAIKAAGIK GVQAQIQGEQ VRVTSKKRDD LQSVIAHLRE HITDFPVQFT NFRD
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