Gene Afer_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0329 
Symbol 
ID8322384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp340216 
End bp341022 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID644951477 
ProductFormiminotransferase domain protein 
Protein accessionYP_003108970 
Protein GI256371146 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3643] Glutamate formiminotransferase 
TIGRFAM ID[TIGR02024] glutamate formiminotransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGAGT GCGTGATCAA TCTCGCCGAA GGGCGAGAGA CACGTGCGGT TGAGGCGATC 
GTCCAGGCAG CAGCCCCCGC GCTCCTCGAC GTCCACGTCG ACGCCGACCA CAATCGCAGC
GTGTTCACCC TCGCTGGTCC CATGGTCGAG GATGCGGCGT GGTCGATAGC GGAGGCCGCC
GCTCACCTCC TCGACATTCG GCACCACGTC GGTGTCCACC CCTGGCTCGG TGCGATCGAC
GTCGTTCCGT TCGTCCCGCT CGGTACCGCG TCGTTGGATG CGGCGATCGA GGCTCGCAAT
CGAATGGGTG CGCGGCTTGC GAGCGAACTC TCGGTACCGG TCTTCTTCTA TGGTCCGGAG
CGCGGCCTGC CGGAGGTGCG CCGTCGAGCG TTTCGCGATC TCGCCCCCGA TCTCCGGCCG
ACTCGGCCGA ATCCGCGCCT CGGTGCCTCC TGCGTCGGTG CCCGGGGCCC GCTCGTCGCC
TACAACGTCG TGGTCGATGC GAGCCTCGAG GTGGCTCGCG AGGTCGCTCG GGAGCTTCGG
GGACCTGCGG TGCGTGCGCT CGCGTTCCAG GCCGGTCGTC GAGTGCAGGT GTCGATGAAC
CTGATCGACC CTCGGGTCGT GGGGCCTGCC CAAGTCGTGG ATCGCATCGC TTCCCGAGTG
TCCGTGCGCG TGTGCGAGCT CGTCGGGTTG GTGCCTCGCT GGGTGCTCGA CGACATCCCT
GCCGAGCGTT GGGCGGAGCT CGATCTTGGA CCAGACCGAA CTATCGAGGT GAGACTCCTG
GCTCGGGGCC TGCCGCTCCC AGCGTGA
 
Protein sequence
MLECVINLAE GRETRAVEAI VQAAAPALLD VHVDADHNRS VFTLAGPMVE DAAWSIAEAA 
AHLLDIRHHV GVHPWLGAID VVPFVPLGTA SLDAAIEARN RMGARLASEL SVPVFFYGPE
RGLPEVRRRA FRDLAPDLRP TRPNPRLGAS CVGARGPLVA YNVVVDASLE VAREVARELR
GPAVRALAFQ AGRRVQVSMN LIDPRVVGPA QVVDRIASRV SVRVCELVGL VPRWVLDDIP
AERWAELDLG PDRTIEVRLL ARGLPLPA