Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0329 |
Symbol | |
ID | 8322384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 340216 |
End bp | 341022 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951477 |
Product | Formiminotransferase domain protein |
Protein accession | YP_003108970 |
Protein GI | 256371146 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3643] Glutamate formiminotransferase |
TIGRFAM ID | [TIGR02024] glutamate formiminotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTCGAGT GCGTGATCAA TCTCGCCGAA GGGCGAGAGA CACGTGCGGT TGAGGCGATC GTCCAGGCAG CAGCCCCCGC GCTCCTCGAC GTCCACGTCG ACGCCGACCA CAATCGCAGC GTGTTCACCC TCGCTGGTCC CATGGTCGAG GATGCGGCGT GGTCGATAGC GGAGGCCGCC GCTCACCTCC TCGACATTCG GCACCACGTC GGTGTCCACC CCTGGCTCGG TGCGATCGAC GTCGTTCCGT TCGTCCCGCT CGGTACCGCG TCGTTGGATG CGGCGATCGA GGCTCGCAAT CGAATGGGTG CGCGGCTTGC GAGCGAACTC TCGGTACCGG TCTTCTTCTA TGGTCCGGAG CGCGGCCTGC CGGAGGTGCG CCGTCGAGCG TTTCGCGATC TCGCCCCCGA TCTCCGGCCG ACTCGGCCGA ATCCGCGCCT CGGTGCCTCC TGCGTCGGTG CCCGGGGCCC GCTCGTCGCC TACAACGTCG TGGTCGATGC GAGCCTCGAG GTGGCTCGCG AGGTCGCTCG GGAGCTTCGG GGACCTGCGG TGCGTGCGCT CGCGTTCCAG GCCGGTCGTC GAGTGCAGGT GTCGATGAAC CTGATCGACC CTCGGGTCGT GGGGCCTGCC CAAGTCGTGG ATCGCATCGC TTCCCGAGTG TCCGTGCGCG TGTGCGAGCT CGTCGGGTTG GTGCCTCGCT GGGTGCTCGA CGACATCCCT GCCGAGCGTT GGGCGGAGCT CGATCTTGGA CCAGACCGAA CTATCGAGGT GAGACTCCTG GCTCGGGGCC TGCCGCTCCC AGCGTGA
|
Protein sequence | MLECVINLAE GRETRAVEAI VQAAAPALLD VHVDADHNRS VFTLAGPMVE DAAWSIAEAA AHLLDIRHHV GVHPWLGAID VVPFVPLGTA SLDAAIEARN RMGARLASEL SVPVFFYGPE RGLPEVRRRA FRDLAPDLRP TRPNPRLGAS CVGARGPLVA YNVVVDASLE VAREVARELR GPAVRALAFQ AGRRVQVSMN LIDPRVVGPA QVVDRIASRV SVRVCELVGL VPRWVLDDIP AERWAELDLG PDRTIEVRLL ARGLPLPA
|
| |