Gene Afer_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0230 
Symbol 
ID8322283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp232925 
End bp233539 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID644951377 
ProductBioY protein 
Protein accessionYP_003108872 
Protein GI256371048 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.949273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGTG AGCGGGTAGT TCGAGCCAGG ACTCTCGGGG ACGTCGTCGC GCCCGGGGCG 
CTCGCGCGTG TCGTGGCGGT CGTCGGCTAC GCGGCCTTCA TCGGAGTGCT CGCCCAGGTG 
GCGATCCCGC TCCCCTTCAC GCCAGTGCCG ATCACCGGTC AGACGTTCGC CGTCCTCCTC 
GGGGCCCTGG CGCTCGGTCC GGGGCTCGCC TTGGCGGGCA CGGCGCTCTA TGCCGCGGTG 
GGGCTCGCGG GGGTGCCGTG GTTCGCGGGA GCGACGGGGG GCCTCCACAT GGTCTCTGAT 
CCATCGTTCG GTTACATCGT CGGTTTCATG GTTGCGGCGG CCTTCGTGGG CTGGCTCGGA 
ACGCGTGGTG CGGATCGTCG ACCGCTCACC ACGATCGTGG CGATGGTGGT CGGCAACCTC 
GCCATCTACG CCGTCGGTGT CGCCTGGCTC GCCGTCGCGC TCGGCGTCTC GCTCCCACGG 
GCGCTCGAAC TCGGCATGGT GCCGTTCGTC GTCGGGGACC TCGTCAAGGT CCTGCTCGCG 
GCGGGCCTGC TGCCGGGAGC GTGGTTCGCA CTGCGCCGTC TCGGTGCACG TGGTGTCGAG 
GGGTCGCGTC CATGA
 
Protein sequence
MLSERVVRAR TLGDVVAPGA LARVVAVVGY AAFIGVLAQV AIPLPFTPVP ITGQTFAVLL 
GALALGPGLA LAGTALYAAV GLAGVPWFAG ATGGLHMVSD PSFGYIVGFM VAAAFVGWLG 
TRGADRRPLT TIVAMVVGNL AIYAVGVAWL AVALGVSLPR ALELGMVPFV VGDLVKVLLA 
AGLLPGAWFA LRRLGARGVE GSRP