Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0167 |
Symbol | |
ID | 8322220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 174746 |
End bp | 175714 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644951314 |
Product | phosphoribulokinase |
Protein accession | YP_003108809 |
Protein GI | 256370985 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0318519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGATG TTGTGCGAAA GGAACCGTCA ATGTCCCATC GAGTGGCCGC CATCCAGAAG GCGACGGCGC GAGGAGCGCA TCCGACGCGC GTGACGATGC TCGCGATCGC CGGAGACTCC GCTTCTGGCA AGACGACCCT GACGAAGGGC ATCACCCAGG CGCTCGGCGC CGAGCGTATC GCGTCGTTCT GCACCGATGA TTATCACCGC TACGACCGGG AGGAGCGGCG TGGACTCCCG TTCACGCCGC TGCATCCCGA GTGCAACTAC CTCGACATTC TCGAGCAGCA TCTCCAGCTC TTGACCCTCG GACAATCGGT GTTGAAGCCG GTGTACCACC ATTCGACGGG CACGCTGGGT CGGCCGGTGC TCTTCGAGCC CAAGGAGATC GTCATCGTCG AGGGTCTGTT CCCACTGTGG TCGAAGCTGT CGCGGGCCAC GTTCGACGTC ACCGTCTTCT TGGACCCACC AGAGGAGGTC CGGCGTCGCT GGAAGATCCA GCGCGACACG GGCAAGCGTG GCTACAGCGA GGACCAAGTG CTCGCCGAGC TCGAGCGTCG CGAGCCCGAG TCGGACGCTT ATATCCGTCC GCAGCGTCGC AACGCAGACA TCGTGATTTC GTTCGCTCCG GTTGCGGGCC GGACCGGCGG AGACGAGACG ATGAGCGCGA CCATCTTGCT GCGTCCGACG ATCCCGCACC CCGACCTGTC GTCGGTGCTC ACGGGCGACA CGCGTGAGTC GGTCCACCTG AAGCTGATTC GTGACCAAGA CGGCAAGCCG GTGGATGCCC TCCACGTCCA CGGCCATGCT CCGACCGAGG TGACCCAGGT CGTCGAGGAG GTGCTCTGGG ACCACATCGG GCTCCCAGGG CCGATCCCCG AACCGCTCGG GGTCATCGGA CCGGGCAAGC GCTCGGCGTC ACTGGCGATC GCGCAGCTGC TCCTCATCTA CCACCTGATC CACGCATAG
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Protein sequence | MIDVVRKEPS MSHRVAAIQK ATARGAHPTR VTMLAIAGDS ASGKTTLTKG ITQALGAERI ASFCTDDYHR YDREERRGLP FTPLHPECNY LDILEQHLQL LTLGQSVLKP VYHHSTGTLG RPVLFEPKEI VIVEGLFPLW SKLSRATFDV TVFLDPPEEV RRRWKIQRDT GKRGYSEDQV LAELERREPE SDAYIRPQRR NADIVISFAP VAGRTGGDET MSATILLRPT IPHPDLSSVL TGDTRESVHL KLIRDQDGKP VDALHVHGHA PTEVTQVVEE VLWDHIGLPG PIPEPLGVIG PGKRSASLAI AQLLLIYHLI HA
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