Gene Afer_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0167 
Symbol 
ID8322220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp174746 
End bp175714 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID644951314 
Productphosphoribulokinase 
Protein accessionYP_003108809 
Protein GI256370985 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0318519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATG TTGTGCGAAA GGAACCGTCA ATGTCCCATC GAGTGGCCGC CATCCAGAAG 
GCGACGGCGC GAGGAGCGCA TCCGACGCGC GTGACGATGC TCGCGATCGC CGGAGACTCC
GCTTCTGGCA AGACGACCCT GACGAAGGGC ATCACCCAGG CGCTCGGCGC CGAGCGTATC
GCGTCGTTCT GCACCGATGA TTATCACCGC TACGACCGGG AGGAGCGGCG TGGACTCCCG
TTCACGCCGC TGCATCCCGA GTGCAACTAC CTCGACATTC TCGAGCAGCA TCTCCAGCTC
TTGACCCTCG GACAATCGGT GTTGAAGCCG GTGTACCACC ATTCGACGGG CACGCTGGGT
CGGCCGGTGC TCTTCGAGCC CAAGGAGATC GTCATCGTCG AGGGTCTGTT CCCACTGTGG
TCGAAGCTGT CGCGGGCCAC GTTCGACGTC ACCGTCTTCT TGGACCCACC AGAGGAGGTC
CGGCGTCGCT GGAAGATCCA GCGCGACACG GGCAAGCGTG GCTACAGCGA GGACCAAGTG
CTCGCCGAGC TCGAGCGTCG CGAGCCCGAG TCGGACGCTT ATATCCGTCC GCAGCGTCGC
AACGCAGACA TCGTGATTTC GTTCGCTCCG GTTGCGGGCC GGACCGGCGG AGACGAGACG
ATGAGCGCGA CCATCTTGCT GCGTCCGACG ATCCCGCACC CCGACCTGTC GTCGGTGCTC
ACGGGCGACA CGCGTGAGTC GGTCCACCTG AAGCTGATTC GTGACCAAGA CGGCAAGCCG
GTGGATGCCC TCCACGTCCA CGGCCATGCT CCGACCGAGG TGACCCAGGT CGTCGAGGAG
GTGCTCTGGG ACCACATCGG GCTCCCAGGG CCGATCCCCG AACCGCTCGG GGTCATCGGA
CCGGGCAAGC GCTCGGCGTC ACTGGCGATC GCGCAGCTGC TCCTCATCTA CCACCTGATC
CACGCATAG
 
Protein sequence
MIDVVRKEPS MSHRVAAIQK ATARGAHPTR VTMLAIAGDS ASGKTTLTKG ITQALGAERI 
ASFCTDDYHR YDREERRGLP FTPLHPECNY LDILEQHLQL LTLGQSVLKP VYHHSTGTLG
RPVLFEPKEI VIVEGLFPLW SKLSRATFDV TVFLDPPEEV RRRWKIQRDT GKRGYSEDQV
LAELERREPE SDAYIRPQRR NADIVISFAP VAGRTGGDET MSATILLRPT IPHPDLSSVL
TGDTRESVHL KLIRDQDGKP VDALHVHGHA PTEVTQVVEE VLWDHIGLPG PIPEPLGVIG
PGKRSASLAI AQLLLIYHLI HA