Gene Afer_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0098 
Symbol 
ID8322149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp103515 
End bp104228 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content71% 
IMG OID644951246 
Product1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 
Protein accessionYP_003108742 
Protein GI256370918 
COG category[R] General function prediction only 
COG ID[COG1691] NCAIR mutase (PurE)-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCCCA TGAGTGAGGA CGGTCTCGTC CGTAGCGATG CCGGTTGGTT CGACACTGCA 
CGCCGGAGGC GGATCGGCCT GCCGGAGGCC ATCTACGCAC CGGGCAAAGC CGAGACCGAC
CTCGTCGCCC TCATCGAGCA GAGTCTCGCC TCCGGCGAGC CGACCATCGT CACACGCGTC
GAGCGCGAGC TGGCCGAGCG GCTCGTCGAC CGGTTCGACC TTCGCCCGTA TCCCGCGCTC
GAACGTCGTG CACCCATGGT GGCGCTCGCC GGCAATCCGG TGCCGTCGTC GTCGCTCGAA
CGCGTCGGGC TGGTCGGGAT TCTTGCGGCG GGGACCTCGG ATCGCCCGGT CGCTGCCGAG
GCCGCGTGTG TCATCGAGAC GCTCGGCCAC AGGACCCGCT TCGTGCTCGA CTGCGGCGTG
GCTGCGCTCG CGCGATCGGT GCGCGCCATG GAGGAGGTGG CCGACGCGGA CGTCGTCGTG
GTCGTCGCTG GTTTCGAGGG TGCGCTGGCC AGCGTGGTCG GCGGTTCGAT GGCCCAACCG
CTCATTGCGG TGCCGACCTC GACCGGGTAC GGGGCAGCCC GTGGCGGTGA GACCGCGTTG
TGGGCCATGC TCGCGACGTG TGCCCAAGGG GTCTGCGTGG TGGGGGTCGA CAACGGATTC
GGCGCCGGGT GCGCTGCGGT GCGCATCGTC GGTGCGGCTG GGCGCAACGC ATGA
 
Protein sequence
MQPMSEDGLV RSDAGWFDTA RRRRIGLPEA IYAPGKAETD LVALIEQSLA SGEPTIVTRV 
ERELAERLVD RFDLRPYPAL ERRAPMVALA GNPVPSSSLE RVGLVGILAA GTSDRPVAAE
AACVIETLGH RTRFVLDCGV AALARSVRAM EEVADADVVV VVAGFEGALA SVVGGSMAQP
LIAVPTSTGY GAARGGETAL WAMLATCAQG VCVVGVDNGF GAGCAAVRIV GAAGRNA