Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0094 |
Symbol | |
ID | 8322143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 97465 |
End bp | 99531 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951240 |
Product | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase |
Protein accession | YP_003108738 |
Protein GI | 256370914 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACGC TTGGCAGCTT CGTCGAGGAC TCGTGGTGGT TCTCCACGGA TCCCGGGCAA CCCGTCCTTG ACGCCACGAC CGGCGAGGAG GTGGCTCGCC TCGCGACGCG AGGACTCCCG ACCGAGGCGA TGGTGCGCTT CGCGCGCGAT GTCGGGGGCC CGGCGCTCCG CGCCCTCGGA TTCCAAGACA GGGGCGCACT GCTCGGTGCA CTCGGGGCGT ACCTCTCGGA GCACGTCGAC ACCCTCCACG ACGCATCGGC CGTCGCTGGC GCAACGGCTC GCGACGCGTG GTTCGACGTC GAAGGGGGCA TCGGCGTCCT CTACAGCTAC GCAAGCCTCG CCAAGCGATC CCTACCGGAG GGCAACGTCC TGCGTGACGG CGAGGTGGAA CGGCTCGATC GCGGTGGCCG CTTCGCGGGG CGTCACATCT TCGTGCCGCG CAGGGGCGTC GAGGTTCAGA TCAACGCCTT CAACTTCCCC GTCTGGGGGC CGCTCGAGAA GCTGGCTCCA GCCCTGCTCG CGGGGATGCC GACCATCATC AAGCCAGCGT CGCAGACCGC CCCGGTCACC CACCGACTCG TGCAGCTCAT CATCGACAGC GGCCTCCTGC CGCCCGGCGC GCTCCAACTG GTGGCGGGCG GCGCCGAGGA TCTCCTCGAC CACCTCGGGC CTCAGGACAC GATCGCCTTC ACCGGTTCGG CGGCGACGGC CGAGCTGCTC CGCTCGCACC CGAGCGTTCG TACCCGCGGC ACCCATCTCA CCGTCGAGAC CGACTCGCTC AACGCATCGA TCCTCGGGCC TGACGCGGTC CCCGGCACGA ACGAATTCGA TCTCTACGTC TCCCAGCTCG TGGACGAACT CACCATCAAG GCGGGGCAGC GCTGTACCGC GATTCGACGC GCGCTCGTGC CGGCAAGCCT GGTAGGACCG GTGGTCGAGG CCGCAACCGA GCGGCTCTCG GCCGTGACCG TGGGCGATCC GCGACGTCCC GACGTGGTGA TGGGACCGCT GGCGAGCCTC GCCCAGCGTG CGGAGGTGCG CGCCCGGATT GACGAGCTCG CCCGCGCAGC AGACGTCGTG GTCGGCGGCG ACCTGGACGA TGTCCTCGGC GCGGACCCGG AGCGAGGCGC CTTCGTCGCC CCCACGTTGC TCGTCGCGCG CGACGCCGAT CGTGACGAGC CCCACCGCAT CGAGGCCTTC GGGCCGGTCG CGACCGTCCT CGGCTATCAG GACCCACAGC ACGCGGCGAA GCTGGCTGCG CGCGGGGCAG GCAGCCTGGT GGCCTCGGTG GTGAGCGCGG ACGCGCGCGT CGTCGACGAG CTCGTGATGG AGCTTGCGCC CTGGCACGGT CGCATCCTCG TGCTCGATGC GACCAGCGCT CCCGCGTCCA CCGGACACGG CTCTCCCTTG CCTCGGCTCC TCCACGGCGG CCCAGGACGA GCCGGTGGCG GCGAGGAACT CGGAGGGATG CGAGCCGTCA CGCGGCACCT CGCACGGACC GCGGTCCAAG GCACACCGAG CGTGCTTGGT CGCATCGCCG CCCAGTGGGT TCCAGGCGCC CCGCGGCACC TCGGTGAGCA CCCGTTTCGC AAGCCCACCT CCGCGCTCCA GCTGGGAGAC GCGATCAGCG CAGGCCCGCG GATCGTCACG GCTGACGACA TCGCCGCCTT CGCGGCCCTC AGCGGCGATC ACTTCTACGC CCATACGAAC CCCGAGGCCG CCGCGGCCAA CCCACTCTTC GGCGGGATCG TTGCGCACGG CTATCTCGTC GTCAGCTTGG CCGCAGGACT CTTCGTCGAT CCAGAGCCGG GCCCAGTACT GGCGAACTAC GGGGTCGACA ACCTCCGCTT CCTCACACCG GTACGCCCGG GCGATGCGCT CTCGGTGACG CTCACCGCGA AGGAGATCAC GCCTCGCGCG GGGATGCCCT ACGACGAGGT TCGGTGGGAT GCCGAGGTGA CACGCGATGG CGACGGAGCG ATCGTGGCTC GCTACGACGT GCTCACGATG GTGGCGAGGA CCTGGCCGCT CGAGGCCGAT CCCGAGGAAT CAGCACCTAG AGGATGA
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Protein sequence | MQTLGSFVED SWWFSTDPGQ PVLDATTGEE VARLATRGLP TEAMVRFARD VGGPALRALG FQDRGALLGA LGAYLSEHVD TLHDASAVAG ATARDAWFDV EGGIGVLYSY ASLAKRSLPE GNVLRDGEVE RLDRGGRFAG RHIFVPRRGV EVQINAFNFP VWGPLEKLAP ALLAGMPTII KPASQTAPVT HRLVQLIIDS GLLPPGALQL VAGGAEDLLD HLGPQDTIAF TGSAATAELL RSHPSVRTRG THLTVETDSL NASILGPDAV PGTNEFDLYV SQLVDELTIK AGQRCTAIRR ALVPASLVGP VVEAATERLS AVTVGDPRRP DVVMGPLASL AQRAEVRARI DELARAADVV VGGDLDDVLG ADPERGAFVA PTLLVARDAD RDEPHRIEAF GPVATVLGYQ DPQHAAKLAA RGAGSLVASV VSADARVVDE LVMELAPWHG RILVLDATSA PASTGHGSPL PRLLHGGPGR AGGGEELGGM RAVTRHLART AVQGTPSVLG RIAAQWVPGA PRHLGEHPFR KPTSALQLGD AISAGPRIVT ADDIAAFAAL SGDHFYAHTN PEAAAANPLF GGIVAHGYLV VSLAAGLFVD PEPGPVLANY GVDNLRFLTP VRPGDALSVT LTAKEITPRA GMPYDEVRWD AEVTRDGDGA IVARYDVLTM VARTWPLEAD PEESAPRG
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