| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0076 |
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| Symbol | |
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| ID | 8322124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 75804 |
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| End bp | 77180 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951221 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003108720 |
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| Protein GI | 256370896 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACCGAC TCGATGATGA ACTCCGGTCG CTCCAAGCGT CGATCGTTCG CTACGCCATG
GAACGCATTG CTCTCCAGCC ACCACCGCTC GACGGGCCGA AGAGCGCCGA CGAACTGCGC
GCGCTCTACG GCGCGAACGT CACCGAGGAC GGTATCGGCG GCGAAGAGGC CTTGCGCCGC
TTCGTCGAGG GCTACGCGCC GGCCACCCTC AGCTCGGATC ACCCTCGGTT CTTGGCGTTC
GTCCCGGTCG CTCCGACCAA GGCAGCGGTG CTCTTCGACA TGATCGTCTC GGCCTCGAGC
ATCTCCGGGA CCTCGTGGCT CGAGGGCGCT GGCGCGGTGT ACCTCGAGAA CGAGGCGCTG
CGCTGGCTCG CCGACCTCAT CGGGTTCCCC GAGACGGCTG GTGGGACGTT CCTGTCGGGA
GGTTCGCTCG CGAACCTTTC CGGTCTTCAC GCAGCGCGTC AGGCGGCCAA GGAGCGCCTC
GGCGGTGTGC GGCCCGATCG CTACCGCATT CTTGCCTCGA CCGAGGCGCA CTCGTCGATT
CGCACGGCAG CTGACGTCAT GGATCTCGAG GTCGTCGAGG TCGAGGTCAA CGATCCGGGA
CGGTTGCGCG GTGAGGACCT CGTACGGACG TGGGCAAAGC TGACCGATGC CGAGCGCAAC
TCGGTGGTCG CTGTCGTGGC AACGGCCGGC ACGACGAACG CGGGCCTCGT CGATGCACTT
GACGAGGTCG CCGACTTTGC CGAGGTCAAC GGGCTCTGGA TGCACGTCGA CGCTGCCTAC
GGTGGTGCTG CGCTCGCGTC CCATCTTCGC GAGCGCTTTC GTGGCATCGA ACGTGCAGGC
TCCGTCGTGA TCGACCCGCA CAAGTGGCTG TTCGCTCCGT TCGATGCTGC GGCCATCGTC
TACCGTGACC CGAACGTTGC TCGGCGGGCC CTGACGCAAG AGGCCGCCTA CCTCGACGAG
ATCAATCGTG CGCCCGACTG GAACCCGTCG AGCTACGGCT ATCACCTCTC GCGGCGAGTT
CGAGGTCTGC CATTCTGGTT CTCGCTCGCG ACGCACGGCA CGCGCCGTTA TCGCGAGGCC
ATCGAAGCGT CGATCACGCT TGCCCACGAG AGCGCCCACG AGATCGAGCG ACGTCCCTAC
CTCGAGCTCG CGATCGAGCC CGAACTGAGC GTCGTGGTGT TTCGACGCCT GGGATGGGAT
GCCGAAGCGT ACGAGCGATG GTCGCGGCAG GCGCTGGTCG ACGGGGTGGG CTTCGTCCTC
CCCACGGCCT ATCGAGGGGA GAAGCTGTTG CGCTTCTGCT TCGTCAATCC ACTGACCACC
CTCGACGACG TACGGGCCAT CCTCGACACG CTCGCGATCG ACCCTCGGCC CTGGTGA
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| Protein sequence | MHRLDDELRS LQASIVRYAM ERIALQPPPL DGPKSADELR ALYGANVTED GIGGEEALRR
FVEGYAPATL SSDHPRFLAF VPVAPTKAAV LFDMIVSASS ISGTSWLEGA GAVYLENEAL
RWLADLIGFP ETAGGTFLSG GSLANLSGLH AARQAAKERL GGVRPDRYRI LASTEAHSSI
RTAADVMDLE VVEVEVNDPG RLRGEDLVRT WAKLTDAERN SVVAVVATAG TTNAGLVDAL
DEVADFAEVN GLWMHVDAAY GGAALASHLR ERFRGIERAG SVVIDPHKWL FAPFDAAAIV
YRDPNVARRA LTQEAAYLDE INRAPDWNPS SYGYHLSRRV RGLPFWFSLA THGTRRYREA
IEASITLAHE SAHEIERRPY LELAIEPELS VVVFRRLGWD AEAYERWSRQ ALVDGVGFVL
PTAYRGEKLL RFCFVNPLTT LDDVRAILDT LAIDPRPW
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