Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0052 |
Symbol | |
ID | 8322099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 50613 |
End bp | 51218 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644951200 |
Product | deoxycytidine triphosphate deaminase |
Protein accession | YP_003108700 |
Protein GI | 256370876 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0717] Deoxycytidine deaminase |
TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTCT CTGACCGCTC GCTCCGCGAC GCCCTCGCGG CTGGTCGGAT CTCGGTCGAT CCGCTCTCGC CCGGTGCCAT CCAGCCGTCA TCGATCGACC TGCGGCTCGA TGCACTCTTT CGGGTGTTCC GCAACTACTC AGCCGGCCAC CTCGACCTTG CTGCCATTCC CGACGACTTG ACCGAGCTCG TCGAGGTCCC CTTCGGGCGA GCGTTCATGC TCCATCCCGG CGAGTTCGTG CTCGGCTCGA CGATCGAGCA CGTGCGCGTC GGCGAGGATC TCGTCGCACG ACTCGAGGGC AAGTCGTCCC TCGGACGCCT CGGTCTTCTG ATCCACTCGA CCGCTGGCTT CATCGATCCC GGCTTCGAAG GCCACGTCAC CCTGGAACTC TCGAACGTTG CTCAGCTTCC GATCACGCTC TATCCCGGCA TGCGGGTCGG GCAGATCTCG TTCTTGCAGA TGACGAGCCC TGCCGAGCAC CCCTACGGTA GTGCCGCACT GGCCTCGAAG TACCAGGGTC AACGCGGCCC GACGCCGTCT CGTTACCACC TCGATCACGA CGACATCAAG GGCGACCGCC GCCACCACGA AGCTACTGAG TGGTAA
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Protein sequence | MILSDRSLRD ALAAGRISVD PLSPGAIQPS SIDLRLDALF RVFRNYSAGH LDLAAIPDDL TELVEVPFGR AFMLHPGEFV LGSTIEHVRV GEDLVARLEG KSSLGRLGLL IHSTAGFIDP GFEGHVTLEL SNVAQLPITL YPGMRVGQIS FLQMTSPAEH PYGSAALASK YQGQRGPTPS RYHLDHDDIK GDRRHHEATE W
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