Gene Afer_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0050 
Symbol 
ID8322097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp47864 
End bp48529 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID644951198 
Productsecreted repeat of unknown function 
Protein accessionYP_003108698 
Protein GI256370874 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGCAG CGCCGTTGGT GCTGGCGAGC TGTCACTTTT CCAACGGCGA CTACGGACCG 
GCGGGTGCCG GTGGGGGCAC GACGTCGTCG GCGAGCTCCG GTCCGATCGG CGCGAACACG 
ACCGCGCCGG ACGCAAAGCT GCTAGGTGGC TCAGCCGCCC CGAAGACAGC GTCGACCTAC 
GACGGTGCTG GCTTTCCGAT TCCGACGTAT CCGCCGGTTC CGTGCCCGAG GGCAACCTGC 
CTCAACGGGT CGCCTCTCGA GCCGGTGGAG ATCTCGTGGC GCAACTCGCC GTATGGGCCG 
ATCCTCACGA CGGCGAGCGG GGAGACCCTC TACCTGCGCC TTGGCGACGG CTTTCGGGAG 
TCGGGCTGCC ATGGCATCTG CCTCCGAGCG TTCCCGCCGT TGCTGACGAA CGGCGCCCCG 
CAGGCGGCCC CTGGTTTGCT CGCGGCGGAT GTGGGCGACT TGACCGCGTC GAACGGGAAG 
GAGCAGGCGT CCTACGGCGG TCACCCGCTC TACACCTACC GTGGCGATAC GAAACCGGGT 
CAGTACGGTG CAGAGGGCAA GGGCGGCATT TGGTACGTGG TCTCGATCAC GGGCCTACCG 
GTCAAGGCGC CGGTGCATTC TGGCACCTCA TCGAGCTCGG CCACTACCTC GACCTCGAAC 
GGCTGA
 
Protein sequence
MVAAPLVLAS CHFSNGDYGP AGAGGGTTSS ASSGPIGANT TAPDAKLLGG SAAPKTASTY 
DGAGFPIPTY PPVPCPRATC LNGSPLEPVE ISWRNSPYGP ILTTASGETL YLRLGDGFRE 
SGCHGICLRA FPPLLTNGAP QAAPGLLAAD VGDLTASNGK EQASYGGHPL YTYRGDTKPG 
QYGAEGKGGI WYVVSITGLP VKAPVHSGTS SSSATTSTSN G