Gene Afer_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0044 
Symbol 
ID8322091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp43956 
End bp44402 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content65% 
IMG OID644951192 
Productsingle-strand binding protein 
Protein accessionYP_003108692 
Protein GI256370868 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCAG GTAACTCCGT CACACTCGTC GGCAACCTCA CGAAGGAGCC AGAACTGCGC 
TTCACCGCCC AGGGTCGGGC CCAGGCGCTC TTCTCCATTG CGGTGAACCG ACGCCGCCTC 
AATCAGCAGA CCCAGGAGTG GGAAGAGTCC ACCTCGTTCT TCGAGGTGAT CTGCTGGGGC 
GACCTCGCCG ACAACGTCTC GACGAGCCTC GAGAAGGGTT CTCGCGCCAT CATCGTGGGC 
CGCCTCGAAC AGCGCAGCTG GGAAACGCCA GAGGGAGAGC GCCGATCCAA GGTTCAGGTC 
GTGGCCGAAG AGGTCGGCCC GTCGCTCCGT TGGGCAACCG CAGAGGTGCA CCGCACCGAG 
CGTCGGACCG GATCGGGCAG ACCCGTGACG AACGAGCCGT CCCCTGTCGC CGACGGGGGC 
GTGGGATACG AAGAGGAGCC GTTCTAA
 
Protein sequence
MSAGNSVTLV GNLTKEPELR FTAQGRAQAL FSIAVNRRRL NQQTQEWEES TSFFEVICWG 
DLADNVSTSL EKGSRAIIVG RLEQRSWETP EGERRSKVQV VAEEVGPSLR WATAEVHRTE 
RRTGSGRPVT NEPSPVADGG VGYEEEPF