Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0041 |
Symbol | |
ID | 8322088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 41325 |
End bp | 43082 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644951189 |
Product | replicative DNA helicase |
Protein accession | YP_003108689 |
Protein GI | 256370865 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase [TIGR01443] intein C-terminal splicing region [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGCT CGCAAGGGCC CGAGGATCGG CTGCCGCCGC ACAACATCGA GGCCGAGGAG TCGCTCCTCG GGGCCATGCT GCTGTCGCGA GAAGCGATCG GGGACGCCGT CGAACTCGTC GAAGCCGACG ACTTCTTTCG ACCGTCACAC CGAGAGCTCT TTCGCGTCCT CGCTGACCTC TACGCCCGCG GTGAGACCAC GGACCCGGTC TCGGTGGGCG ACGAACTCCG TCGCCTGGGC ATCGAGGAGG CGCTCGGTGG TCAAGAGGGG CTGAACCGTC TGGTCATCCA GACCCCAGCC ATCGCGTCCG CCGGGCGCTA CGCCCAGATC GTCCGCGACT ACGGGATCCT TCGGCGCCTC ATCCGGACCG CCTCTGACAT CGCCGAGGAG GCCTACGGCC TCCCGAAGGA CGTACGCGCG CTGCTCGATC ACGCCGAGGC CAGCATCCTG AACGTCGCGC GGGGCACGAG TCACGAGTCC GCGGCGCACC TCGAGCAGGT GCTGATGGAG GTCCTCGAGC AGCTCGAGCA GGTCGCCGGC TCCGACGATC TGGGCGCCTT CGCCGTCCCG ACCGGCTTTC GCGACCTCGA TGAGCTGCTC ACGGGCTTGC ATCGATCGAA CCTCATCATC GTCGGTGCTC GACCGGGCAT GGGCAAGACG TCCTTCGCGC TCTCGATGGC GCTGAACGTC GCCCGCAACC AGAGCGAGCC CGTCCTGCTG TTCTCGCTCG AGATGAACCG CATCGAGCTC GGCCAGCGGC TGGTCGCGTC GCAGGCGCGC GTCAATTCGC AACGCCTCCG CTCCGGCCGT CTGAACGAAC GCGAGTGGGA TCAGGTCTCC AACGCCGCCG GCGAACTCGC CACGCGCCCG ATCCTCATTG ATGACGACCC GAACCTGACC GTCCTCGACC TCCGCACGCG CGCGCGGCGT ATCAAGGCCG AGCAAGGACT CTCGCTCGTC GTCATCGACT ACCTCCAGCT GATGAGCAGT CGACGCCAGA GCGAGTCACG GCAGCTCGAG GTCTCCGAGA TCTCCCGTGG CCTCAAGCTG CTCGCCCGCG AGCTCGACGT GCCGATCATC GCGCTCTCCC AGCTGTCGCG CAACCTCGAA TCACGCAGCG ATCGTCGCCC GCAACTCGCG GACCTCCGCG AGTCCGGTTG CCTCTCGTGG GACGCCAAGG TACGCCTCGC CGACGGTACC GAGGTTCCCA TCGGCATGCT CTGGAGCAAG GGGGCGAGAT CCGTTCCGCT CGCATCCGTC ACCCCCGAGG GCGTGCCGAC GGTCGCCATG GGTACACGCG TCGTGGCCAC CGGCCTCAAG CCACTGCGAC GCCTGACCCT CGCCAACGGC TCGATCCTCC GCGCGACCGG CAATCACCCG ATCGCCACAT CGTCGGGATG GCGGGAGGCC GGGACCCTCG TATCCGGCGA CGTGGTCCAC GTCCTCCTGG ATGCGACTAC GGTGGCGACG ACCGTCGTCG AGTCGGTCGA CGAACTCGGC ACGGAGCTCG TCTTCGATAT CGAGGTACCC GAGACGCATG CGTTCGTCGC CGACGGCGTC ATCGTGCACA ACTCTCTCGA GCAAGACGCC GACGTGGTCA TGTTCATCTA CCGAGACGAG CTGTACCACC CCGACACCAC CGATCGCGGC GTCGCCGAGA TCATCGTCGC CAAGCACCGC AACGGTCCCC AGGGCACCGT CAACCTGGCC TTCATCGCCG ACTGGACCCG CTTCGCAGAT ATCGCGCCCA GCGACTAG
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Protein sequence | MARSQGPEDR LPPHNIEAEE SLLGAMLLSR EAIGDAVELV EADDFFRPSH RELFRVLADL YARGETTDPV SVGDELRRLG IEEALGGQEG LNRLVIQTPA IASAGRYAQI VRDYGILRRL IRTASDIAEE AYGLPKDVRA LLDHAEASIL NVARGTSHES AAHLEQVLME VLEQLEQVAG SDDLGAFAVP TGFRDLDELL TGLHRSNLII VGARPGMGKT SFALSMALNV ARNQSEPVLL FSLEMNRIEL GQRLVASQAR VNSQRLRSGR LNEREWDQVS NAAGELATRP ILIDDDPNLT VLDLRTRARR IKAEQGLSLV VIDYLQLMSS RRQSESRQLE VSEISRGLKL LARELDVPII ALSQLSRNLE SRSDRRPQLA DLRESGCLSW DAKVRLADGT EVPIGMLWSK GARSVPLASV TPEGVPTVAM GTRVVATGLK PLRRLTLANG SILRATGNHP IATSSGWREA GTLVSGDVVH VLLDATTVAT TVVESVDELG TELVFDIEVP ETHAFVADGV IVHNSLEQDA DVVMFIYRDE LYHPDTTDRG VAEIIVAKHR NGPQGTVNLA FIADWTRFAD IAPSD
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