| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0040 |
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| Symbol | |
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| ID | 8322087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 40429 |
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| End bp | 41328 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644951188 |
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| Product | 3-methyl-2-oxobutanoatehydroxymethyltransferase |
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| Protein accession | YP_003108688 |
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| Protein GI | 256370864 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.441156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTCAG CGTCGATGAG CGACCGTATC GCGACGGTCC CGGCCATCGC TGGATCGAAG
GTACGCTCCG GGAGTCGGCC ACTCGTCATG GTGACCGCCT ACGACGCGCC AGGGGCGCGC
ATTGCCGACG ACGGTGGCGT CGACATGATC CTCGTCGGCG ACTCGGTGGC GATGGCGGTG
CTCGGCATGC CCGACACGCT CGGGGTGCGG GTCCGTGACA TCGCCCACCA CGTAGCGGCG
GTGCGGCGGG CGCAGCCGAG AGCCCTCGTC GTCGCGGATC TGCCATGGTT GAGCTACCAC
CGCGGACGTC GCCGTGCAGT CGAGGCCGCC GGCAAGCTCG TGCGCGCCGG CGCGCAGGCC
GTCAAGCTGG AGGGGGGTCG CGAACGCCTT GACGTCATCG ACGCACTCGT GCGCGCGCAG
ATCCCGGTGA TGGGTCACCT CGGCCTCACC CCCCAGAGCG CGAACGTCTT CGGTGGCATG
GTCGTCCAAG GCCGTTCGAT CGTCGCGGCC GAACGCATCC TCGCAGACGC CATGGCCCTC
GAGCAGGCGG GGGTCTTCGC CATGGTCCTC GAGGGAATTC CGGCCCCGAT CGCCTCGGTC
GTGACGGCTC GCGTCGGCGT CCCGACCATC GGTATCGGTG CGGGCGCAGG TTGCGATGGG
CAGGTCCTCG TGTTCCACGA TCTGCTCGGG TTCGCCGATG GCCATCGGCC GCGGTTCGTC
AAGACCTATG CGGAGCTCGG CGCCGCGGCT CGCGAGGCGG TCGCCGCCTG GGCCAAGGAC
GTGACGGAGG GCGCCTATCC CGATGACGCG CATGCCTACC GCGCCTCTAC CGAGCTCGCT
GCGTGGGCCG AGCGACAGCT CACGAGCGAG GAGCGTCGTG GGGGCGCGCC TCGCTCCTAG
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| Protein sequence | MESASMSDRI ATVPAIAGSK VRSGSRPLVM VTAYDAPGAR IADDGGVDMI LVGDSVAMAV
LGMPDTLGVR VRDIAHHVAA VRRAQPRALV VADLPWLSYH RGRRRAVEAA GKLVRAGAQA
VKLEGGRERL DVIDALVRAQ IPVMGHLGLT PQSANVFGGM VVQGRSIVAA ERILADAMAL
EQAGVFAMVL EGIPAPIASV VTARVGVPTI GIGAGAGCDG QVLVFHDLLG FADGHRPRFV
KTYAELGAAA REAVAAWAKD VTEGAYPDDA HAYRASTELA AWAERQLTSE ERRGGAPRS
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