Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0035 |
Symbol | |
ID | 8322082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 35856 |
End bp | 36818 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644951183 |
Product | proline-specific peptidase |
Protein accession | YP_003108683 |
Protein GI | 256370859 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0847997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCTGC ACGACTATCT CGACGCGCGC ACCCGCGACG ACGCTCTCTC GGGTGGTGCC CGCCGCATCC CGATCCACAC GCCTCGAGGG ACCTTCTCGG TGTGGACCAA GCGAGTGGGC AACGCCCCTG ACCTGCGAGT CCTGCTGCTC CACGGCGGTC CCGGCGCGAC GAGCGAGTAC TTCGAGTGCT TCGACAGCTA CCTGCCGCTC GCTGCGATCG AGTACATCTA CTACGACCAG CTCGGCTGCG GCCGCAGCGA CCGTCCCGAC GACCCCAGCC TCTGGACACT CGATCGCTAC GTCGACGAGG TGGAACAGGT TCGACGAGCC CTCGGCCTCG ACGCGTCCAA CTTCGTGCTG CTCGGGCACT CCTGGGGAGG CATCCTCGCC ATGGAGTACG CCATCCGACA CGGCGACACG CTCCGAGGGC TGGTCATCTC CAACATGATG GCGAGTGCTC CCGCCTACAA CCGTTACGCC GACGAGGTCC TCATCCCGGC CCTCGACCCA GCGATCGTCG CCGAAGCACG AGCGCTCGAG GCCGCCGGCG ACACCGAGAG CGGCCGCTAC GAGGAACTGC TCATGGGGAG CTACTACCTC GAACACACGC TGCGCATGCC GCTCGACGAG TGGCCCGAGC CGGTGGTACG CGCCTTCGCC CACACCAATC GCGACATCTA CGTGCCGATG CAGGGCCCGA GCGAGATGGG CATGGCGGGC GACGCCTCGC TGAAGGACTG GGATCGCTTC GACGATCTGG TATCCATCGA GGTGCCGACG CTCGTCATCG GCGCGACTCA TGACACCATG GACCCGGACC ACATGCGCCA GATGGCAGAG CGTCTCCCGC AGGGCCAGTT CCTCCTATGT CCGAACGGGA GCCACATGTG CATGTACGAC GACCAGGCGA CCTACATGGC GGGGCTCATC GAGTTCCTCA CCGCACTGCG CGAGAGGGCG TAG
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Protein sequence | MDLHDYLDAR TRDDALSGGA RRIPIHTPRG TFSVWTKRVG NAPDLRVLLL HGGPGATSEY FECFDSYLPL AAIEYIYYDQ LGCGRSDRPD DPSLWTLDRY VDEVEQVRRA LGLDASNFVL LGHSWGGILA MEYAIRHGDT LRGLVISNMM ASAPAYNRYA DEVLIPALDP AIVAEARALE AAGDTESGRY EELLMGSYYL EHTLRMPLDE WPEPVVRAFA HTNRDIYVPM QGPSEMGMAG DASLKDWDRF DDLVSIEVPT LVIGATHDTM DPDHMRQMAE RLPQGQFLLC PNGSHMCMYD DQATYMAGLI EFLTALRERA
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