Gene Afer_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0034 
Symbol 
ID8322081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp35214 
End bp35567 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content68% 
IMG OID644951182 
Productprotein of unknown function DUF86 
Protein accessionYP_003108682 
Protein GI256370858 
COG category[S] Function unknown 
COG ID[COG2361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.225981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCCTC GGGAACGTCA GCGCCTTCAG GACATTCTCG TCGCCATCGC CGTCATCCGC 
TCACACCTCG AGCGTGGTGA CCTCAATGAC GGGCTCGTCG TCGACGCGGT ACGAGTCCGG
CTCATCGAGA TCGGCCAAGC CGTCAAGGCT CTCCCCCAGG AGCTGCTCGC ACAGGAGCCA
GCCCTCCCCT GGGCGCAGAT CGCCGGCATG CGAGACCGTC TCGCCCATCG CTACTTCGAC
GCCTCGCACG CCATCCTTGC CGCCACCGTC AACGAGGACC TCCCCATCCT CGAGGCGGCT
GTTGGCCGTC TCGAGCGGAT CGTGGCGGAT GCGGCCGTCT GGCCACGGCC GTGA
 
Protein sequence
MSPRERQRLQ DILVAIAVIR SHLERGDLND GLVVDAVRVR LIEIGQAVKA LPQELLAQEP 
ALPWAQIAGM RDRLAHRYFD ASHAILAATV NEDLPILEAA VGRLERIVAD AAVWPRP