| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0024 |
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| Symbol | |
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| ID | 8322070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 25103 |
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| End bp | 26134 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951171 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_003108672 |
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| Protein GI | 256370848 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCCGGA TCCTCTACGC CACGCACGAA CGGTTCTTGG AGCACGACGC TGGAGCGTGG
CACCCAGAGC GTGCCGAGCG ACTCGAGGTC GTCCGCCATG CGCTCAGCCA CTTCGAGGAC
GCCGTCACGA TCGTCACGCC GACACCTGCA CCCCGAGCCG CCATCGAAGC GGTCCACACC
CCAGCGCACG TCGAGGCACT GGAGCGTTAC TGCCTCATGG GTGGCGGTCC GATCGACCCC
GACACCTCGG TGAACGACGC GTCGTTCGAG GCCGCCCAGC TCGCCGCGGG CGCTGGGCTC
GACGCGATCG AGCGGCTTCG ACAGGGCGAG GCCGACGCCG CCTTCCTCGC CGTACGACCG
CCCGGCCACC ATGCCACGGT CGACCAGGCC ATGGGGTTCT GCCTCCTCAA CAACGTCGCC
ATCGCCGCCC AGGCGCTGAT CGACCAGGGC GAGCGCGTCC TCATTCTCGA TATCGATGCG
CACCATGGCA ACGGCACCGC CGCGATCTTC GAGCGCGAAC CTCGTGTGCT CTACGTCTCC
ACACACCAGT ACCCCTTGTT CCCAGGGACT GGGCGCATCG GCGACGTCGG GGATGGCCCT
GGGGTCGGCA CCACGATCAA CCTGCCGCTC CCCCCGCAGA CGTCGGGCCA GACGGCACGG
GCACTCCTCG AAACCATCGC GCTCCCCGCC ATCACCACGT TCGGCCCGAC GTGGGCGATC
GTGTCCGCTG GCTACGACGC CCATCGCGAC GATCCGCTCA CCGAACTCGA CTTTCGCGCC
CCCGACTATG CACCATTGAT CGCCATCGCG CGCGACGCCG TTCCCCCAGG CCGCCTGATC
CTCGCGCTCG AGGGTGGCTA CGACCTCGAA GCGCTCGAGC ACTCGACGCT GGTCACGTTC
GCGACGCTCC TGCATGCGGC GGTCGACGTC GGTGAGGCCC CGAGCCGCGA TGTCGACCAC
GAGCTCGTGA CGACCCTCCA ACGGCTGCAT CGTGCCGCAC TCGAGCGAGG TCTCGCGAAC
GAGCGCGGGT AG
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| Protein sequence | MGRILYATHE RFLEHDAGAW HPERAERLEV VRHALSHFED AVTIVTPTPA PRAAIEAVHT
PAHVEALERY CLMGGGPIDP DTSVNDASFE AAQLAAGAGL DAIERLRQGE ADAAFLAVRP
PGHHATVDQA MGFCLLNNVA IAAQALIDQG ERVLILDIDA HHGNGTAAIF EREPRVLYVS
THQYPLFPGT GRIGDVGDGP GVGTTINLPL PPQTSGQTAR ALLETIALPA ITTFGPTWAI
VSAGYDAHRD DPLTELDFRA PDYAPLIAIA RDAVPPGRLI LALEGGYDLE ALEHSTLVTF
ATLLHAAVDV GEAPSRDVDH ELVTTLQRLH RAALERGLAN ERG
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