Gene Afer_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0023 
Symbol 
ID8322069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp23703 
End bp25091 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content69% 
IMG OID644951170 
Productpolynucleotide adenylyltransferase/metal dependent phosphohydrolase 
Protein accessionYP_003108671 
Protein GI256370847 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR02692] tRNA adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCCCCG CCCTACTCCG CCCACTCATC GAGGCGCTCC GACCGCTTGC CGCACGCTTC 
GACGAACGAC AACGCCACCT CTACCTCGTC GGCGGCGTGG TCCGCGACGC ACTGCTCGGC
ATCGAGCCGA ACGGTGACGT GGATGCCACG ACGGACGCGA CGCCCGAGGA GATCGTGGAG
ATCGTCAGAC CCGTCGCGAC GCACTTCAAC CTGACCGGCC TCCGCTTCGG GACGGTCGCC
TTCCACTATC ACGGCGTGCC GCTCGAAGTC ACGACCCACC GAGGCGAGGC CTACGACTCC
TCCACCCGCA AGCCGACCGT GCACTTCGTC TCGGCGCTCG CCGAGGATCT CCTCCGACGC
GACTTCACGG TGAACGCCAT GGCGGTCGAG GTCACGAGCG ATGACCCGAC CCTGATCGAC
CCGTTCGGCG GGATGGAGGA CCTTCTCGCG CGCCGATTGC GCACTCCCAT GGACCCCCGA
CGCTCCTTCA GCGACGATCC GCTGCGCATG TTGCGCTGTG CACGCTTCAT CGCGCGCTTG
GATCTCGAGC CGCAGCGCGC GCTCGTCGAC GCGGTCCACG AACTCGCCCC GCGCCTCGAG
GTCGTCTCGC GTGAGCGCAT CCGCGACGAG CTCTCTCGAC TGCTCGTCGT GCCCGATCCG
AGCAAGGGTC TCTGGTTCCT CGTCGACACG CCCCTCGCCG CCGAGTTCCT CCCGGAGCTT
CCGGCGCTCA GGCTCGAGCA GGACCCCATC CATCACCACA AGGACGTACT CGCCCACACC
ATCGCGGTCA CCGCAAGCTG CTCACCGCGG CTCCGCCTGA GGCTCGCCGC CCTCCTCCAC
GACATCGGCA AGCCTGCGAC TCGCGAGATC GGGCCGAACG GCGTGAGTTT CCACTTCCAC
GACGTTGTCG GGGCTCGTAT GGCCCGTCGC ATCCTGCGAG AGCTGCGCTA CCCCAACGAC
CTCGTCGACG ACGTCGCTCG CCTCGTCGAG CTTCACCTGC GCTTCCACAC CTATGCTCAG
GGTTGGAGCG ACGCCGCCGT CCGTCGCTAC GTGCGCGACG CAGGCGAGCT CCTCGAGGAC
CTGAACGAGC TCACCACCTG CGACGCGACC ACCCGCAACG AGCGCCGACG ACGCATGTTC
GCCGAGCGCA TGGCGACGTT CGAAGAGCGC GCACGGGAGC TCGCCGAGCG CGACGCGCTC
CGAGCGCGTC GGCCTCCGAT CGACGGACTG GAGGTCATGC GCATCCTCGA GATCCCACCA
GGTCCTGCCG TGGGCCGCGC GATGCGCTTC CTCACCGACC TCACGATCGA CGAGGGGCTG
AACGATCCCG ACGAGGCGAG GCGCCGCCTC CTCGAGTGGT GGCGGTCCCA CTCGGGCGAG
GAGGCCTAA
 
Protein sequence
MLPALLRPLI EALRPLAARF DERQRHLYLV GGVVRDALLG IEPNGDVDAT TDATPEEIVE 
IVRPVATHFN LTGLRFGTVA FHYHGVPLEV TTHRGEAYDS STRKPTVHFV SALAEDLLRR
DFTVNAMAVE VTSDDPTLID PFGGMEDLLA RRLRTPMDPR RSFSDDPLRM LRCARFIARL
DLEPQRALVD AVHELAPRLE VVSRERIRDE LSRLLVVPDP SKGLWFLVDT PLAAEFLPEL
PALRLEQDPI HHHKDVLAHT IAVTASCSPR LRLRLAALLH DIGKPATREI GPNGVSFHFH
DVVGARMARR ILRELRYPND LVDDVARLVE LHLRFHTYAQ GWSDAAVRRY VRDAGELLED
LNELTTCDAT TRNERRRRMF AERMATFEER ARELAERDAL RARRPPIDGL EVMRILEIPP
GPAVGRAMRF LTDLTIDEGL NDPDEARRRL LEWWRSHSGE EA