| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0022 |
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| Symbol | |
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| ID | 8322068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 22318 |
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| End bp | 23706 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951169 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_003108670 |
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| Protein GI | 256370846 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACC TCGCGTCGAT CACGTGGACG ACCGTCGCCC TGGTCGTCCT CCTGGTGTTC
CCCTTCGCGA ACGAGCTCGT GAGTCCCTGG ATCGCCGTGC TCGCCCTCCC GTACTTCTTC
GCGATGTCGA CGGACCTGAA GTACGCCGGC TATCACCGTC GCGACATCTT CTCGATCTAT
GGTTTCAACC TGATCCTCGT CATGGTGAAC CTGGCTGGCA CCGTCAGCTC GATCGGCCAG
GCCGTCACCG GGGCTCGAGC TTCGTTCGCC CGAACCCCGA AGGTGCGCAA GCGCACAGTC
ACCCCGCTCA TGTTCGTGGT GGCTCCGTAC GCGCTCGTGG TGTTGTCGAT CTACACCCTC
TTGCATGACT GGGAGCACCA CGCACTCAAC TCGATGCTCT TCGCGGCGAT CAACCTGGTC
CTCGCGGCCG TTGCCATCGT CGCCTTCATC GGCGTGCGCA ACAGCATCCA GGACGTGTGG
ATCCAGATCC TCCCATGGTT CCAGCGGCGC ACGAAGAACC GTCCCGTCCG CACGACACGC
CATCAAGAGG TGCCCGTCGG AGTCGGGGGC ACCCAACTGG GAACCTGGGA GCACGTCCTC
GATCTCGGTG CGTCCTCGAT CGGGTTGGGC GAGGCCGTCG ATACCGACGG GCCTGGTCGG
TTGCGCGTCG GTTCGCGAGC AGAGCGCGAA CGGGCGCGGC GCCGGCTAGC CGACTACGGG
CTGAGCGCGC TCGCCCAGCC GATCCGTGAC ATTGAGGCCG ACGAGATCGT CGGCTACGAG
ATCTATCAAC GGGTCAACGG TGAGGCACCG CCAGCCCAGC TCGCCAGGCT CGACACGGTC
GAAGCGGCCA GCCTTGAGCA GCGGCTCCTG GAGCGCGCCG CACTGCTGGC ACGTGACATC
CCTGAGGGCG CGTGGCTGAG CGTGAATGTG TCGTCGCGAT TCTTGACCCT GATGGAAGGG
CGGCGACGCT TTTCCCTGAC GGCGCGCGAG GGGCTGTTCC TCGACGTGTC GTTCACCGGC
GTGCTCGACG GCCCTCACGT CGCGGCCACA GAGGACACGC TCTCGCGTGC GACGAACCGG
TTCGCGATCG CCCTGGACGA TTTCGTCCCC GATGCAGGAT CCCTGGCGGT GGTTCGTCGG
GTGCGGCCGA GCATGGTGAA GCTCGATCCC GACTGGGTGC ATGATCTCCC CAAGAGTGCC
GCGAAGCGTG GCCAGACCGA ACTCCTGCTG CGTCTCGCTG CGCCGCGTAC GCTCGTGGTC
GCCGAGGGCG TCGAGGACGA GCGAGAGCTT GCGGCGCTGC GCGCGCTCGG GGTGCGGTTT
GCCCAGGGGT ACCTCCTCGG TCGACCGGTC CCGCTCGAGG AGACCAAGAG CATCGCTCCT
CGCGATTAG
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| Protein sequence | MNYLASITWT TVALVVLLVF PFANELVSPW IAVLALPYFF AMSTDLKYAG YHRRDIFSIY
GFNLILVMVN LAGTVSSIGQ AVTGARASFA RTPKVRKRTV TPLMFVVAPY ALVVLSIYTL
LHDWEHHALN SMLFAAINLV LAAVAIVAFI GVRNSIQDVW IQILPWFQRR TKNRPVRTTR
HQEVPVGVGG TQLGTWEHVL DLGASSIGLG EAVDTDGPGR LRVGSRAERE RARRRLADYG
LSALAQPIRD IEADEIVGYE IYQRVNGEAP PAQLARLDTV EAASLEQRLL ERAALLARDI
PEGAWLSVNV SSRFLTLMEG RRRFSLTARE GLFLDVSFTG VLDGPHVAAT EDTLSRATNR
FAIALDDFVP DAGSLAVVRR VRPSMVKLDP DWVHDLPKSA AKRGQTELLL RLAAPRTLVV
AEGVEDEREL AALRALGVRF AQGYLLGRPV PLEETKSIAP RD
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